KtrD - Revision history

Jstuelk at 18:29, 16 December 2016

2016-12-16T18:29:02Z

2015-07-27T11:24:17Z

‎Biological materials

2015-07-27T11:23:59Z

‎Biological materials

2014-04-02T13:32:21Z

2014-01-07T10:37:25Z

2013-11-18T14:16:06Z

2013-05-16T13:06:19Z

2013-05-14T10:02:14Z

2013-05-13T12:39:38Z

2012-12-03T07:24:28Z

← Older revision		Revision as of 18:29, 16 December 2016
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		+	{{#bank: ktrD}}
	* '''Description:''' low affinity potassium transporter [[KtrC]]-[[KtrD]], integral membrane subunit <br/><br/>		* '''Description:''' low affinity potassium transporter [[KtrC]]-[[KtrD]], integral membrane subunit <br/><br/>

@@ Line 127: / Line 127: @@
 * '''Mutant:'''
-** GHB12 ( ''ktrD''::''tet''), {{PubMed|12562800}}, available in [[Erhard Bremer]]'s and [[Jörg Stülke]]'s labs
+** GHB12 (''ktrD''::''tet''), {{PubMed|12562800}}, available in [[Erhard Bremer]]'s and [[Jörg Stülke]]'s labs
-** 1A956 ( ''ktrD''::''tet''), {{PubMed|12562800}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A956&Search=1A956 BGSC]
+** 1A956 (''ktrD''::''tet''), {{PubMed|12562800}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A956&Search=1A956 BGSC]
 * '''Expression vector:'''

← Older revision		Revision as of 11:23, 27 July 2015
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	* '''Mutant:'''		* '''Mutant:'''
		+	** GHB12 ( ''ktrD''::''tet''), {{PubMed\|12562800}}, available in [[Erhard Bremer]]'s and [[Jörg Stülke]]'s labs
	** 1A956 ( ''ktrD''::''tet''), {{PubMed\|12562800}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A956&Search=1A956 BGSC]		** 1A956 ( ''ktrD''::''tet''), {{PubMed\|12562800}}, available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A956&Search=1A956 BGSC]

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 === Database entries ===
 * '''DBTBS entry:''' no entry
@@ Line 97: / Line 98: @@
 === Database entries ===
 * '''Structure:'''

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 |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=KtrD KtrD]
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH Metal ion homeostasis], [http://subtiwiki.uni-goettingen.de/pathways/stress_response.html Stress]'''
+|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH Metal ion homeostasis], [http://subtiwiki.uni-goettingen.de/subtipathways/search.php?enzyme=ktrD ktrD]'''
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.224

@@ Line 16: / Line 16: @@
 |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13500 ktrD]
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/KtrD KtrD]
+|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=KtrD KtrD]
 |-
 |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://cellpublisher.gobics.de/view/GqbblRJkBH Metal ion homeostasis], [http://subtiwiki.uni-goettingen.de/pathways/stress_response.html Stress]'''

@@ Line 31: / Line 31: @@
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
-|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ktrD_1416067_1417416_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ktrD_expression.png|500px]]
+|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ktrD_1416067_1417416_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ktrD_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13500]]
 |-
 |}

@@ Line 26: / Line 26: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[htpX]]'', ''[[ykzP]]''
 |-
-|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13500 Advanced_DNA]
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13500 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13500 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13500 DNA_with_flanks]
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:ykrM_context.gif]]

@@ Line 24: / Line 24: @@
 |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1347 bp, 449 aa
 |-
-|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[htpX]]'', ''[[ykzE]]''
+|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[htpX]]'', ''[[ykzP]]''
 |-
 |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13223&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''