yodQ

yodQ
168

putative deacylase

locus
BSU_19710
Molecular weight
48.39 kDa
pI
5.41
Protein length
Gene length
function
unknown
product
putative deacylase
essential
no
synonyms
yodQ, argE

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0624 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,141,703  2,143,013
The protein
Protein family
[wiki|peptidase M20A family] (according to UniProt)
Structure
[PDB|3PFO] (from Rhodopseudomonas Palustris 37% identity)
[AF|O34984]
Paralogous protein(s)
[protein|392921E3C53846236DF75D7585697969B11AF2F3|ylmB]
Expression and Regulation
Operons
genes
[gene|13DC4296015A28975BC7697F134FB6ECD6B11489|yodT]-[gene|D8A050BF150C6E5B910C24C0E023F0829EC95BAD|yodS]-[gene|138832210AC94B17E081F3D0AF9BCFE3BE63E601|yodR]-[gene|161ADC907D4902001C8751F51CFA762828C26110|yodQ]-[gene|39749B5EADC3C056BAF232E0B586C65B989F7F77|yodP]-[gene|21589FEBDE54C66DE2A3DCFC2D7BF3AEEC84B44C|kamA]-[gene|A4A099EE3368891C2AD6C2D1DCBE7B238227417F|yokU]-[gene|0A33869E05CC9B49699555EA19D0905A55CA35B9|yozE]
description
[Pubmed|22383849,14523133]
regulation
expressed early during sporuation in the mother cell ([protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]) [Pubmed|14523133]
sigma factors
[protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE]: sigma factor, [Pubmed|14523133], in [regulon|protein:3CB24D493B3282278B7DC61CE3C793DFA815F9E2|sigE regulon]
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[gene|13DC4296015A28975BC7697F134FB6ECD6B11489|yodT]→[gene|0A33869E05CC9B49699555EA19D0905A55CA35B9|yozE]

2024-10-09 16:11:46

Jstuelk

69

44c21f8f9a51cb42563a9e5c6caad0babb60d90a

17328CC7373AFF7A88C018C39EBE54803F7E1157

Biological materials
Mutant
BKE19710 ([gene|161ADC907D4902001C8751F51CFA762828C26110|yodQ]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19710 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_GTCTTGCATCCTCATTCCCC,  downstream forward: _UP4_CTTCATACAGATGGGGAGGA
BKK19710 ([gene|161ADC907D4902001C8751F51CFA762828C26110|yodQ]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19710 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_GTCTTGCATCCTCATTCCCC,  downstream forward: _UP4_CTTCATACAGATGGGGAGGA
References
14523133

161ADC907D4902001C8751F51CFA762828C26110

Page visits: 1690

Time of last update: 2024-10-11 22:09:58

Author of last update: Melvin.boenninger