SubtiBank SubtiBank
Version comparison:

Sun Dec 18 2016 13:18:42 GMT+0100 (CET)Sun Dec 18 2016 20:11:32 GMT+0100 (CET)

The RNA

Catalyzed reaction/ biological activity

hybridizes to ''[[protein|ahrC]]'' mRNA and inhibits [[protein|AhrC]] translation. [Pubmed|17020585]

hybridizes to ''[[protein|ahrC]]'' mRNA and inhibits [[protein|AhrC]] translation [Pubmed|17020585]

Extended information on the RNA

Protein family

the peptide is conserved in bacilli

Extended information on the RNA

[SW|Interactions]

[[protein|GapA]]-[[protein|YkzW]] [Pubmed|20444087]

Extended information on the RNA

Additional information

Information on the structure of the RNA can be found in [Pubmed|17020585]

= Extended information on the protein =

[SW|Interactions]:

[[protein|GapA]]-[[protein|YkzW]] [Pubmed|20444087]

Biological materials

Mutant

168 sr1::cat, available in [SW|Brantl] lab

GP2210 (''[[protein|sr1]]''::''cat''), available in [SW|Jörg Stülke]'s lab

GP2215 (''[[protein|sr1]]''::''aphA3''), available in [SW|Jörg Stülke]'s lab

GP2216 (''[[protein|sr1]]''::''phleo''), available in [SW|Jörg Stülke]'s lab

168 ykzW::cat, available in [SW|Sabine Brantl]'s lab

GP2210 (''[[protein|ykzW]]''::''cat''), available in [SW|Jörg Stülke]'s lab

GP2215 (''[[protein|ykzW]]''::''aphA3''), available in [SW|Jörg Stülke]'s lab

GP2216 (''[[protein|ykzW]]''::''phleo''), available in [SW|Jörg Stülke]'s lab

References

16164558, 17020585, 17576690, 20444087

16164558, 17020585, 17576690, 20444087, 23034808, 27449348

The peptide

Catalyzed reaction/ biological activity:

the peptide controls the stability of the ''[[protein|cggR]]-[[protein|gapA]]'' mRNA [Pubmed|20444087]

The peptide

Protein family:

the peptide is conserved in bacilli

The peptide

[SW|Interactions]:

[[protein|GapA]]-[[protein|YkzW]] [Pubmed|20444087]

The RNA

[SW|Interactions]

[[protein|ahrC]] mRNA-[[protein|ykzW]] RNA [Pubmed|20444087]

The RNA

Additional information

Information on the structure of the RNA can be found in [Pubmed|17020585]

Database entries

BsubCyc

[http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU14629&redirect=T BSU14629]

Database entries

UniProt

[http://www.uniprot.org/uniprot/C0H410 C0H410]