SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:35 GMT+0100 (CET)2025-05-07 08:08:38

locus

BSU27150

BSU_27150

ec

outlinks

bsu

BSU27150

BSU_27150

aminos

MKGNEEHDIQKELKRYELFFKKRYKVLYTVNDFIIGAMFLVGSFFFFYDRLMSAGIWLFAIGSLLLLIRPTIRLIHDFHYRKHVEQQFKHQSSTDD

[SW|Categories] containing this gene/protein

[SW|membrane proteins], [SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

Gene

Coordinates on the chromosome (coding sequence)

2,773,356 -> 2,773,646

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

Expression and Regulation

Operon

''[[protein|sigV]]-[[protein|rsiV]]-[[protein|oatA]]-[[protein|yrhK]]'' [Pubmed|21856855]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigV]] [Pubmed|21856855]

Expression and Regulation

Regulation

induced by lysozyme ([[protein|SigV]]) [Pubmed|21856855]

Expression and Regulation

Additional information

A [[protein|ncRNA]] ([SW|RnaC]) is encoded between '[[protein|yrhK]]' and '[[protein|yrhJ]]' [PubMed|25790031]

proteinLength

96

geneLength

291

Gene

Coordinates

2,773,356 → 2,773,646

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A147 (yrhK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/147 NBRP B. subtilis, Japan]

BKE27150 (Δ[[gene|yrhK]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATCATCCCTCCATTCA, downstream forward: _UP4_TGATCTTAAGGAATAAGAAA

BKK27150 (Δ[[gene|yrhK]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATCATCCCTCCATTCA, downstream forward: _UP4_TGATCTTAAGGAATAAGAAA