SubtiBank SubtiBank
Version comparison:

2017-05-09 15:36:372025-05-10 20:04:18

locus

BSU22140

BSU_22140

geneLength

762

765

product

outlinks

bsu

BSU22140

BSU_22140

The protein

Catalyzed reaction/ biological activity

2-deoxy-D-gluconate + NAD+ = 3-dehydro-2-deoxy-D-gluconate + NADH (according to Swiss-Prot)

2-dehydro-3-deoxy-D-gluconate + NAD+ --> 3-deoxy-D-glycero-2,5-hexodiulosonate + H+ + NADH (according to UniProt)

The protein

Protein family

phosphopentomutase family (according to Swiss-Prot)

[SW|Short-chain dehydrogenases/reductases (SDR) family] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|4HP8] (from Agrobacterium tumefaciens, 54% identity)

Biological materials

Mutant

BKE22140 (Δ[[gene|kduD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE22140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAAGGCGTCATGTAGATAAC, downstream forward: _UP4_TGACAAATAAAAAAGCTGAC

BKK22140 (Δ[[gene|kduD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK22140 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAAGGCGTCATGTAGATAAC, downstream forward: _UP4_TGACAAATAAAAAAGCTGAC