Tue Dec 13 2016 11:16:33 GMT+0100 (CET)2025-05-25 22:50:45
description
similar to transcriptional regulator (GntR family)
similar to transcriptional regulator ([SW|GntR family])
locus
BSU16810
BSU_16810
product
transcriptional regulator (GntR family)
transcriptional regulator ([SW|GntR family])
ec
outlinks
bsu
BSU16810
BSU_16810
aminos
10-MONOMERputativetranscriptionalregulator(GntRfamily)1754785..1755510BacillussubtilissubtilisMSTKADNRHLYLKVIERIKEDIKNGIYTEKEKLPSEFELSKKLGVSRATLREALRILEEEHVIIRRHGVGTFVHSKPLFLSGIEQLNSVTKMIEQANMTPGTIFLSSQVLMPSEDDTKRFHLAEGQELFYLERVRTADGQPIVYCIDKIPMNILPNSFSHQQESMFDLLEKNSGSVISYAVTDIEPIGYHDTISPVLECDPETALLLLKQTHYDQHDKPVLYSLNYFRADKFRFHVLRKRF
[SW|Categories] containing this gene/protein
[SW|transcription factors and their control]
Gene
Coordinates on the chromosome (coding sequence)
1,754,785 -> 1,755,510
References
proteinLength
241
geneLength
726
Gene
Coordinates
1,754,785 → 1,755,510
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|HTH gntR-type domain] (aa 8-76) (according to UniProt)
The protein
Structure
[PDB|2WV0] ([[protein|NagR]], corresponds to aa 83 ... 307 of YmfC, 30% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-B115 (ymfC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1114 NBRP B. subtilis, Japan]
BKE16810 (Δ[[gene|ymfC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE16810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTCCCCTCCGTAAAC, downstream forward: _UP4_TAAAAACGGACGCCTGTATG
BKK16810 (Δ[[gene|ymfC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTCCCCTCCGTAAAC, downstream forward: _UP4_TAAAAACGGACGCCTGTATG