Tue Dec 13 2016 11:16:37 GMT+0100 (CET)2025-06-26 05:50:37
description
two-component response regulator (OmpR family), regulation of the ABC transporter YxdL-YxdM in response to the cationic antimicrobial peptide, LL-37
two-component response regulator ([SW|OmpR family]), regulation of the ABC transporter [[protein|YxdL]]-[[protein|YxdM]] in response to the cationic antimicrobial peptide, LL-37
locus
BSU39660
BSU_39660
product
two-component response regulator (OmpR family)
two-component response regulator ([SW|OmpR family])
ec
outlinks
bsu
BSU39660
BSU_39660
aminos
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISARSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKESKLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS
[SW|Categories] containing this gene/protein
[SW|transcription factors and their control], [SW|resistance against toxins/ antibiotics], [SW|phosphoproteins]
Gene
Coordinates on the chromosome (coding sequence)
4,072,284 -> 4,072,973
Expression and Regulation
Operon
''[[protein|yxdJ]]-[[protein|yxdK]]'' [Pubmed|10746760]
References
proteinLength
229
geneLength
690
Gene
Coordinates
4,072,284 → 4,072,973
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|Response regulatory domain] (aa 3-116) (according to UniProt)
The protein
Structure
[PDB|5DCL] (NisR from Streptococcus agalactiae, 41% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-B702 (yxdJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1701 NBRP B. subtilis, Japan]
BKE39660 (Δ[[gene|yxdJ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE39660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAACTGAACCACTCCCGTT, downstream forward: _UP4_GGCTACCAGCTGAGGGCGCA
BKK39660 (Δ[[gene|yxdJ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK39660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAACTGAACCACTCCCGTT, downstream forward: _UP4_GGCTACCAGCTGAGGGCGCA