SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:34 GMT+0100 (CET)2025-05-22 15:50:31

locus

BSU19290

BSU_19290

ec

outlinks

bsu

BSU19290

BSU_19290

aminos

MGIFSVSRSTDAKKLEALLVEGERIESIYKLRVDQICFTNKRIIFFDNKMFSKKKVRVFLPYKTIESFAIQEAGMFDPDTGLLLMTRSKTFELEFAKDTDLSEVQAVLTKHLCS

[SW|Categories] containing this gene/protein

[SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

Gene

Coordinates on the chromosome (coding sequence)

2,099,446 -> 2,099,790

Expression and Regulation

Operon

''yozO'' [Pubmed|11866510]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigW]] [Pubmed|11866510]

Expression and Regulation

Regulation

induced by alkali shock ([[protein|SigW]]) [Pubmed|11866510]

References

11866510

11866510, 19913036

proteinLength

114

geneLength

345

Gene

Coordinates

2,099,446 → 2,099,790

The protein

Structure

[PDB|3DCX] (from Shewanella loihica, 32% identity) [pubmed|19913036]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B418 (yozO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1417 NBRP B. subtilis, Japan]

BKE19290 (Δ[[gene|yozO]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAGAACCCCTCTTTC, downstream forward: _UP4_TGAATATTTGATGAGCCAGC

BKK19290 (Δ[[gene|yozO]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19290 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAGAACCCCTCTTTC, downstream forward: _UP4_TGAATATTTGATGAGCCAGC