SubtiBank SubtiBank
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Mon Aug 31 2015 13:51:44 GMT+0200 (CEST)2025-05-31 14:57:16

description

promoter of RecA DNA repair center assembly

promoter of [[protein|RecA]] DNA repair center assembly

locus

BSU00040

BSU_00040

function

DNA repair/ recombination

[[category|DNA repair/ recombination]]

product

promoter of RecA DNA repair center assembly

promoter of [[protein|RecA]] DNA repair center assembly

essential

ec

outlinks

bsu

BSU00040

BSU_00040

syns

[SW|Categories] containing this gene/protein

[SW|DNA repair/ recombination]

The protein

Protein family

recF family (according to Swiss-Prot)

RecF family (single member, according to UniProt)

Expression and Regulation

Operon

''[[protein|yaaA]]-[[protein|recF]]-[[protein|yaaB]]-[[protein|gyrB]]'' [Pubmed|2987848]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|2987848]

References

Reviews

22933559

22933559, 32286623

References

Original publications

2987848, 15186413, 9207023, 24285298, 24891441, 1716726, 1909186, 8510642

2987848, 15186413, 9207023, 24285298, 24891441, 1716726, 1909186, 8510642, 29391496

proteinLength

370

geneLength

1113

Gene

Coordinates

3,437 → 4,549

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|5Z67] (from Thermoanaerobacter tengcongensis, 33% identity) [pubmed|29391496]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

GP3529 (Δ[[gene|recF]]::spec), available in [SW|Jörg Stülke]'s lab

BKE00040 (Δ[[gene|recF]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE00040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GATATACAATCAGTGTCACC, downstream forward: _UP4_AAGTGAAGAAATGAGGTGAG

BKK00040 (Δ[[gene|recF]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK00040 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GATATACAATCAGTGTCACC, downstream forward: _UP4_AAGTGAAGAAATGAGGTGAG