SubtiBank SubtiBank
Version comparison:

Mon May 16 2016 17:21:36 GMT+0200 (CEST)2025-05-28 21:21:54

locus

BSU36840

BSU_36840

product

ATP synthase (subunit delta))

ATP synthase (subunit delta)

ec

outlinks

bsu

BSU36840

BSU_36840

[SW|Categories] containing this gene/protein

[SW|ATP synthesis], [SW|phosphoproteins], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,785,403 -> 3,785,948

The protein

Protein family

ATPase delta chain family (according to Swiss-Prot)

ATPase delta chain family (single member, according to UniProt)

The protein

Structure

[PDB|see here an overview on ATPase structure]

[PDB|5T4O] (ATPase from E. coli, 25% identity) [pubmed|28001127]

The protein

[SW|Localization]

membrane (Heterogeneous) [Pubmed|16479537]

peripheral via theF0 complex

membrane (Heterogeneous) [Pubmed|16479537]

peripheral via the F0 complex

http://subtiwiki.uni-goettingen.de/v3/gene/view/E956A30D97B2941108880F3AD48620C4DB6E0EBD

The protein

[SW|Interactions]

[[AtpB|A]](1)-[[AtpF|B]](2)-[[AtpE|C]](12) - [[AtpA|alpha]](3)-[[AtpD|beta]](3)-[[AtpG|gamma]]-[[AtpH|delta]]-[[AtpC|epsilon]]

Expression and Regulation

Operon

''[[protein|atpI]]-[[protein|atpB]]-[[protein|atpE]]-[[protein|atpF]]-[[protein|atpH]]-[[protein|atpA]]-[[protein|atpG]]-[[protein|atpD]]-[[protein|atpC]]'' [Pubmed|9353933]

Expression and Regulation

Regulation

[[protein|RelA]] dependent downregulation (Class I) during stringent response [Pubmed|11948165]

References

Original publications

7961438, 22517742, 16479537

7961438, 22517742, 16479537, 28001127, 30580998

proteinLength

181

geneLength

546

Gene

Coordinates

3,785,403 → 3,785,948

The protein

Paralogous protein(s)

[[this]]

The protein

Effectors of protein activity

ATPase activity is inhibited upon binding of Mg-ADP to [[protein|AtpD]] [pubmed|30580998]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE36840 (Δ[[gene|atpH]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCGTTTAGAGACAGCTGATC, downstream forward: _UP4_AATCGATAGAAGGGGTGAAA

BKK36840 (Δ[[gene|atpH]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TCGTTTAGAGACAGCTGATC, downstream forward: _UP4_AATCGATAGAAGGGGTGAAA