Tue Dec 13 2016 11:16:35 GMT+0100 (CET)2025-05-22 16:00:11
description
SigE-dependent sporulation gene, similar to UDP-glucose 4-epimerase
[[protein|SigE]]-dependent sporulation gene, similar to UDP-glucose 4-epimerase
locus
BSU25350
BSU_25350
ec
outlinks
bsu
BSU25350
BSU_25350
aminos
MKNKWLSFFSGKVQLELTGRGIERLLNECTRQGIPVFHVKKKKEAVSLYIQLQDVHAFRRVRSKFKCKARFINRKGFPFLLLKSKLNIGFTIGFAIFFILLFLLSNMVWKIDVTGAKPETEHQMRQHLNEIGVKKGRLQFLMMSPEKIQKSLTNGIDNITWVGVDLKGTTIHMKVVEKNEPEKEKYVSPRNIVAKKKATITRMFVQKGQPMAAIHDHVEKGQLLVSGLIGSEDHQQEVASKAEIYGETWYRSEVTVPLETLFNVYTGKVRTKHKLSFGSLAIPIWGMTFKKEELKHPKTEQEKHSLHFLGFKLPVSYVKEQTRESEEALRKYTKEEAVQEGIKLGKQDVEDKIGENGEVKSEKVLHQTVENGKVKLIILYQVIEDIVQTTPIVRETEE
[SW|Categories] containing this gene/protein
[SW|sporulation proteins]
Gene
Coordinates on the chromosome (coding sequence)
2,615,452 -> 2,616,648
Gene
Phenotypes of a mutant
defect in sporulation [Pubmed|14523133]; some reduction in [SW|SigG] activity and production of small spores [Pubmed|26735940]
defect in sporulation [Pubmed|14523133]; some reduction in [[protein|SigG]] activity and production of small spores [Pubmed|26735940]
Expression and Regulation
Operon
''[[protein|yqfC]]-[[protein|yqfD]]'' [Pubmed|12662922]
Expression and Regulation
[SW|Sigma factor]
[[protein|SigE]] [Pubmed|12662922]
Expression and Regulation
Regulation
expressed early during sporulation in the mother cell ([[protein|SigE]], [SW|SpoIIID]) [Pubmed|12662922,15383836]
Expression and Regulation
Regulatory mechanism
[SW|SpoIIID]: transcription repression [Pubmed|15383836]
proteinLength
398
geneLength
1197
Gene
Coordinates
2,615,452 → 2,616,648
The protein
Paralogous protein(s)
[[this]]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-C444 (yqfD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2442 NBRP B. subtilis, Japan]
BKE25350 (Δ[[gene|yqfD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE25350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCACAACATTTCCCCCTC, downstream forward: _UP4_CCTATTGTCAGGGAGACTGA
BKK25350 (Δ[[gene|yqfD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK25350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCACAACATTTCCCCCTC, downstream forward: _UP4_CCTATTGTCAGGGAGACTGA