SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:30 GMT+0100 (CET)2025-04-30 04:52:10

locus

BSU03540

BSU_03540

ec

outlinks

bsu

BSU03540

BSU_03540

aminos

MIQYASESINLPGEITFKDVREIFFYQIAKISCFYFLLFCAIFAAVNFINGWPRIVYGSDALNLFMNSMLIIVMSVLFTLLLLLLLYVKFSRAYKKNERMKSKRTYTLNQEGIRICSKKYDLIFNWDEITAVFEYKNIFRVNTSSGQYIAIPKHFFHSEEEMNRFKEIILKNTETKKLKFKKDQH

[SW|Categories] containing this gene/protein

[SW|membrane proteins], [SW|proteins of unknown function]

Gene

Coordinates on the chromosome (coding sequence)

404,458 -> 405,015

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

Expression and Regulation

Operon

''[[protein|ycxC]]-[[protein|ycxB]]'' (according to [http://dbtbs.hgc.jp/COG/prom/ycxCB.html DBTBS])

ycxB (internal promoter) (according to [http://dbtbs.hgc.jp/COG/prom/ycxCB.html DBTBS])

proteinLength

185

geneLength

558

Gene

Coordinates

404,458 → 405,015

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C058 (ycxB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2056 NBRP B. subtilis, Japan]

BKE03540 (Δ[[gene|ycxB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGGTAAACCTACACCT, downstream forward: _UP4_CAGCATTGACAGTGCTGATC

BKK03540 (Δ[[gene|ycxB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACGGTAAACCTACACCT, downstream forward: _UP4_CAGCATTGACAGTGCTGATC