SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-23 16:53:58

description

unknown

similar to dehydratase

locus

BSU05250

BSU_05250

ec

outlinks

bsu

BSU05250

BSU_05250

aminos

MKLDEFTIGQVFKTKSLKVSKDDIMRFAGEFDPQYMHVDEEKASKGRFNGIIASGIQTLAISFKLWIEEGFYGDDIIAGTEMNHMTFIKPVYPDDELFTIVEVLDKQPKRNELGILTVLLSTYNQKEVKVFEGELSVLIKR

[SW|Categories] containing this gene/protein

[SW|proteins of unknown function]

Gene

Coordinates on the chromosome (coding sequence)

572,974 -> 573,399

proteinLength

141

geneLength

426

Gene

Coordinates

572,974 → 573,399

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

MaoC-like domain (aa 8-112) (according to UniProt)

The protein

Structure

[PDB|3EXZ] (from Rhodospirillum rubrum, 38% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C135 (ydeM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2133 NBRP B. subtilis, Japan]

BKE05250 (Δ[[gene|ydeM]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05250 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTTACACCTCTATTTT, downstream forward: _UP4_TAACTCAGAAAGCCCGCTTT

BKK05250 (Δ[[gene|ydeM]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05250 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTTACACCTCTATTTT, downstream forward: _UP4_TAACTCAGAAAGCCCGCTTT