Mon Aug 31 2015 13:53:37 GMT+0200 (CEST)2025-05-28 17:48:19
locus
BSU11381
BSU_11381
ec
outlinks
bsu
BSU11381
BSU_11381
syns
[SW|Categories] containing this gene/protein
[SW|ABC transporters], [SW|membrane proteins], [SW|pseudogenes]
The protein
[SW|Interactions]
([[protein|AppD]]-[[protein|AppF]])-([[protein|AppB]]-[[protein|AppC]])-[[protein|AppA]] [Pubmed|10092453]
Expression and Regulation
Operon
''[[protein|appD]]-[[protein|appF]]-[[protein|appA]]-[[protein|appB]]-[[protein|appC]]'' [Pubmed|7997159]
Expression and Regulation
Regulation
repressed during exponential growth ([[protein|ScoC]]) [Pubmed|10383984]
repressed during growth in the presence of branched chain amino acids ([[protein|CodY]]) [Pubmed|12618455]
Expression and Regulation
Regulatory mechanism
[[protein|ScoC]]: transcription repression [Pubmed|10383984]
[[protein|CodY]]: transcription repression [Pubmed|12618455]
[[protein|TnrA]]: transcription activation [Pubmed|25755103]
Biological materials
Mutant
GP2100 (D(''[[protein|appD]]-[[protein|appF]]-[[protein|appA]]-[[protein|appB]]-[[protein|appC]]'')::''spc''), available in [SW|Jörg Stülke]'s lab
GP2100 (D(''[[gene|appD]]-[[gene|appF]]-[[gene|appA/2]]-[[gene|appB]]-[[gene|appC]]'')::''spc''), available in [SW|Jörg Stülke]'s lab
BKE11381 (Δ[[gene|appA/1]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11381 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGATATTCCCCCTCTT, downstream forward: _UP4_ATGCTGAAATCCGTAGAAAA
BKK11381 (Δ[[gene|appA/1]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11381 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGATATTCCCCCTCTT, downstream forward: _UP4_ATGCTGAAATCCGTAGAAAA
References
proteinLength
154
geneLength
465
Gene
Coordinates
1,213,537 → 1,214,001
The protein
Protein family
[SW|bacterial solute-binding protein 5 family] (according to UniProt)
The protein
Paralogous protein(s)
[[this]]
The protein
Structure
[PDB|1XOC] (the intact protein) [pubmed|15588833]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]