SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:3Tue Dec 13 2016 11:16:37 GMT+0100 (CET)

proteinLength

264

geneLength

792

Gene

Coordinates

4,059,488 → 4,060,282

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B782 (yxeM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1781 NBRP B. subtilis, Japan]

1A950 ( ''yxeM''::''cat''), [Pubmed|15262924], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A950&Search=1A950 BGSC]

1A950 ( ''yxeM''::''cat''), [Pubmed|15262924], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A950&Search=1A950 BGSC]

aminos

MKMKKWTVLVVAALLAVLSACGNGNSSSKEDDNVLHVGATGQSYPFAYKENGKLTGFDVEVMEAVAKKIDMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDERKETYNFTKPYAYAGTQIVVKKDNTDIKSVDDLKGKTVAAVLGSNHAKNLESKDPDKKINIKTYETQEGTLKDVAYGRVDAYVNSRTVLIAQIKKTGLPLKLAGDPIVYEQVAFPFAKDDAHDKLRKKVNKALDELRKDGTLKKLSEKYFNEDITVEQKH

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|biosynthesis/ acquisition of amino acids], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

4,059,488 -> 4,060,282

The protein

[SW|Interactions]

[[protein|YxeO]]-[[protein|YxeN]]-[[protein|YxeM]] [Pubmed|10092453]

Expression and Regulation

Operon

''[[protein|yxeK]]-[[protein|snaB]]-[[protein|yxeM]]-[[protein|yxeN]]-[[protein|yxeO]]-[[protein|sndB]]-[[protein|yxeQ]]'' [Pubmed|10746760]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|16513748]

Expression and Regulation

Regulation

repressed in the presence of cysteine ([[protein|CymR]]) [Pubmed|16513748]

Expression and Regulation

Regulatory mechanism

[[protein|CymR]]: transcription repression [Pubmed|16513748]

Expression and Regulation

Additional information

the amount of the mRNA is substantially decreased upon depletion of [[Rny|RNase Y]] [PubMed|21815947]