Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-28 13:28:54
locus
BSU06110
BSU_06110
ec
outlinks
bsu
BSU06110
BSU_06110
aminos
MDKSSKFFFEDQKYNKERIVRVLGGNLALLKSKGILYEDSSGDLIFNYVGVISNGRNVIFILPKYCNRHLDEHSKRTLFNKLLKIFKKYSGLNKSRESDYFVSELDSDEVSDFMIADYLLNDFSLNGYYQKKFTEYEIDGEGIIDWSKTVNEITPVFSKGVPYYFSTYNEVVQKDEYHLIVKIHKWALSKYFNDFGVILGFTGLEFDKSCDGMKILDYADFFGSVINKEIVNTYVDRDVKLLKALKTAIDREENQFSKRPTLSLYGTKYFHRVWEEVCKTVFSHVNEYVKKISRPNWINFTDIEVNKEKKTLEPDIIKAFEYRSKEYFLILDAKYYNINFDGKKLEGNPGVEDITKQLLYDKALEKLSRGKTKHNAFLFPSSNSTNTFKVFGSVDFDFLDIAAVTLVYISAEQVYNLYLENKTFSTDDLFKFVSEINKSKKRHSVITSTLYGNMFLFTKRLSDKN
[SW|Categories] containing this gene/protein
[SW|DNA restriction/ modification], [SW|prophage 3]
Gene
Coordinates on the chromosome (coding sequence)
661,630 -> 663,027
Expression and Regulation
Operon
''[[protein|ydiR]]-[[protein|ydiS]]-[[protein|ydjA]]'' [Pubmed|11751814]
proteinLength
465
geneLength
1398
Gene
Coordinates
661,630 → 663,027
The protein
Catalyzed reaction/ biological activity
Endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates (according to UniProt)
The protein
Paralogous protein(s)
[[this]]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-C209 (ydjA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2207 NBRP B. subtilis, Japan]
BKE06110 (Δ[[gene|ydjA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GAACTTACTTGACTTATCCA, downstream forward: _UP4_TAGTTCTAGAAGGTTAAAAG
BKK06110 (Δ[[gene|ydjA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GAACTTACTTGACTTATCCA, downstream forward: _UP4_TAGTTCTAGAAGGTTAAAAG