2017-07-24 09:35:17Tue Dec 13 2016 11:16:35 GMT+0100 (CET)
proteinLength
128
geneLength
384
Gene
Coordinates
2,966,413 → 2,966,793
The protein
Catalyzed reaction/ biological activity
S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl)-methylsulfonium salt + CO2 (according to Swiss-Prot)
S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl)-methylsulfonium salt
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
References
[SW|Categories] containing this gene/protein
[SW|miscellaneous metabolic pathways], [SW|biofilm formation]
Gene
Coordinates on the chromosome (coding sequence)
2,966,413 -> 2,966,793
Expression and Regulation
Operon
''[[protein|gapB]]-[[protein|speD]]'' [Pubmed|15720552]
''[[protein|speD]]'' [Pubmed|10844697]
Expression and Regulation
[SW|Sigma factor]
''[[protein|gapB]]'': [[protein|SigA]] [Pubmed|15720552]
''[[protein|speD]]'': [[protein|SigA]] [Pubmed|10844697]
Expression and Regulation
Regulation
''[[protein|gapB]]'': repressed in the presence of glucose ([[protein|CcpN]]) [Pubmed|15720552]
Expression and Regulation
Regulatory mechanism
[[protein|CcpN]]: transcription repression [Pubmed|15720552]
Expression and Regulation
Additional information
'[[protein|speD]]': the mRNA is substantially stabilized upon depletion of [[Rny|RNase Y]] (the half-life of the monocistronic 'speD' mRNA increases from 1.4 to 36 min) [PubMed|21815947]