SubtiBank SubtiBank
Version comparison:

2017-05-24 16:11:10Wed Mar 30 2016 16:59:26 GMT+0200 (CEST)

proteinLength

197

geneLength

591

Gene

Coordinates

3,546,234 → 3,546,827

Gene

Phenotypes of a mutant

increased thermotolerance due to increased stabiliy of [[protein|Spx]] and thus increased expression of ''[[gene|trxA]]'' [Pubmed|24417481]

the mutation suppresses the heat sensitivity of spores overexpressing ''[[gene|cmpA]]'' [Pubmed|26387458]

non-motile [Pubmed|27014237]

increased thermotolerance due to increased stabiliy of [[protein|Spx]] and thus increased expression of ''[[protein|trxA]]'' [Pubmed|24417481]

the mutation suppresses the heat sensitivity of spores overexpressing ''[SW|cmpA]'' [Pubmed|26387458]

non-motile [Pubmed|27014237]

The protein

additional information

belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

''clpP::spec'' and ''clpP::cat'', available in the [SW|Leendert Hamoen] lab

BP99 (''clpP''::''tet''), available in [SW|Fabian Commichau]'s lab [Pubmed|25610436]

GP551 (spc), available in [SW|Jörg Stülke]'s lab

QB4916 (spc), available in [SW|Ulf Gerths]'s and [SW|Jörg Stülke]'s labs

1S139 (''clpP''::''erm''), available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S139&Search=1S139 BGSC]

1S140 ( ''clpP''::''spec''), available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S140&Search=1S140 BGSC]

BKE34540 (''[[gene|clpP]]''::''erm'', available in the BGSC and in [SW|Jörg Stülke]'s lab)

GP1822 and GP1786 (''[[gene|clpP]]''::''erm'', available in [SW|Jörg Stülke]'s lab)

GPUG1 (erm), available in [SW|Ulf Gerth]'s and [SW|Jörg Stülke]'s labs

''clpP::spec'' and ''clpP::cat'', available in the [SW|Leendert Hamoen] lab

BP99 (''clpP''::''tet''), available in [SW|Fabian Commichau]'s lab [Pubmed|25610436]

GP551 (spc), available in [SW|Jörg Stülke]'s lab

QB4916 (spc), available in [SW|Ulf Gerths]'s and [SW|Jörg Stülke]'s labs

1S139 (''clpP''::''erm''), available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S139&Search=1S139 BGSC]

1S140 ( ''clpP''::''spec''), available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1S140&Search=1S140 BGSC]

BKE34540 (''[[protein|clpP]]''::''erm'', available in the BGSC and in [SW|Jörg Stülke]'s lab)

GP1822 (''[[protein|clpP]]''::''erm'', available in [SW|Jörg Stülke]'s lab)

GPUG1 (erm), available in [SW|Ulf Gerth]'s and [SW|Jörg Stülke]'s labs

References

Original Publications

9643546, 10809708, 11807061, 9987115, 14679237, 18689476, 15317791, 17586624, 11684022, 12923101, 17560370, 16899079, 19226326, 20070525, 9987115, 11544224, 14763982, 9643546, 19767395, 11112444, 9535081, 18689473, 20305655, 20852588, 16200071, 21969594, 22080375, 22517742, 17380125, 12598648, 9890793, 20049702, 20049702, 23927726, 24263382, 24226776, 24417481, 15378759, 23361916, 24942655, 25212124, 25433860, 25610436, 26387458, 27014237, 27669037

9643546, 10809708, 11807061, 9987115, 14679237, 18689476, 15317791, 17586624, 11684022, 12923101, 17560370, 16899079, 19226326, 20070525, 9987115, 11544224, 14763982, 9643546, 19767395, 11112444, 9535081, 18689473, 20305655, 20852588, 16200071, 21969594, 22080375, 22517742, 17380125, 12598648, 9890793, 20049702, 20049702, 23927726, 24263382, 24226776, 24417481, 15378759, 23361916, 24942655, 25212124, 25433860, 25610436, 26387458, 27014237

[SW|Categories] containing this gene/protein

[SW|proteolysis], [SW|general stress proteins (controlled by SigB)], [SW|heat shock proteins], [SW|phosphoproteins], [SW|most abundant proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,546,234 -> 3,546,827

The protein

[SW|Interactions]

forms a complex structure of two heptameric rings [Pubmed|26639779]

[[protein|ClpE]]-[[protein|ClpP]], [[protein|ClpC]]-[[protein|ClpP]], [[protein|ClpX]]-[[protein|ClpP]]

[[protein|CtsR]]-[[protein|ClpP]]/[[protein|ClpC]] (degradation of [[protein|CtsR]]) [Pubmed|11179229,16163393,17380125]

[[protein|McsB]]-[[protein|ClpP]]/[[protein|ClpC]] (rapid degradation of non-phosphorylated [[protein|McsB]]) [Pubmed|20852588]

[[protein|Spx]]-[[protein|ClpP]]/[[protein|ClpX]] (degradation of [[protein|Spx]]) [Pubmed|17827297]

Expression and Regulation

Operon

''clpP'' [Pubmed|9643546]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|9643546], [[protein|SigB]] [Pubmed|9643546,11544224]

Expression and Regulation

Regulation

induced by stress ([[protein|SigB]]) [Pubmed|9643546,11544224]

induced by heat ([[protein|CtsR]]) [Pubmed|9987115]

Expression and Regulation

Regulatory mechanism

[[protein|CtsR]]: transcription repression [Pubmed|9987115,11179229,16163393,17380125]

Expression and Regulation

Additional information

belongs to the 100 [SW|most abundant proteins] [PubMed|15378759]