SubtiBank SubtiBank
Version comparison:

Mon Aug 31 2015 13:54:43 GMT+0200 (CEST)2025-05-30 02:24:15

description

response regulator aspartate phosphatase, controls ComA activity

response regulator aspartate phosphatase, controls [[protein|ComA ]]activity

locus

BSU18910

BSU_18910

function

control of ComA activity

control of [[protein|ComA ]]activity

ec

outlinks

bsu

BSU18910

BSU_18910

syns

yobG

[SW|Categories] containing this gene/protein

[SW|genetic competence], [SW|protein modification], [SW|transcription factors and their control], [SW|quorum sensing]

The protein

[SW|Interactions]

[[protein|RapK]]-[[protein|PhrK]] [Pubmed|16816200]

Expression and Regulation

Operon

''[[protein|rapK]]-[[protein|phrK]]'' [Pubmed|11466295]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigH]] [Pubmed|11466295]

Expression and Regulation

Regulation

induced under conditions of phosphate limitation ([[protein|PhoP]]) [Pubmed|25666134]

Expression and Regulation

Regulatory mechanism

[[protein|PhoP]]: transcription activation [Pubmed|25666134]

[[protein|AbrB]]: transcription repression [Pubmed|20817675]

References

11466295, 16816200, 20817675, 25225273, 25666134

11466295, 16816200, 20817675, 25225273, 25666134, 23526881

proteinLength

371

geneLength

1116

Gene

Coordinates

2,062,150 → 2,063,265

The protein

Protein family

[SW|RAP family] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

six [SW|TPR repeat|tetratrichopeptide repeats] (according to UniProt)

The protein

Structure

[PDB|4I1A] ([[protein|RapI]], 30% identity) [pubmed|23526881]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE18910 (Δ[[gene|rapK]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18910 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTAAACCCCTCTTTCTG, downstream forward: _UP4_ATGAATCAGGTGGAGGGAAT

BKK18910 (Δ[[gene|rapK]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18910 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTAAACCCCTCTTTCTG, downstream forward: _UP4_ATGAATCAGGTGGAGGGAAT