SubtiBank SubtiBank
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Tue Dec 13 2016 11:16:32 GMT+0100 (CET)2025-05-09 19:06:39

description

MarR/DUF24 family transcription regulator

[SW|MarR family|MarR/DUF24 family] transcription regulator

locus

BSU13760

BSU_13760

product

MarR/DUF24 family transcription regulator

[SW|MarR family|MarR/DUF24 family] transcription regulator

ec

outlinks

bsu

BSU13760

BSU_13760

aminos

MKKFSCGFEVTKEVIGGKWKGLVLYFLMNGPKRTSELKRIIPNITQKMLIQTLRELEASGLVSRKMYNQVPPKVEYSSTELGESLKPILQELCQWGGYYAEQEYAEGEYEIVQPEQLS

[SW|Categories] containing this gene/protein

[SW|transcription factors and their control]

Gene

Coordinates on the chromosome (coding sequence)

1,442,347 -> 1,442,703

The protein

Protein family

[[MarR/DUF24 family]]

[SW|MarR family|MarR/DUF24 family]

The protein

Paralogous protein(s)

[[protein|HypR]], [[protein|YdeP]]

[[this]]

proteinLength

118

geneLength

357

Gene

Coordinates

1,442,347 → 1,442,703

The protein

[SW|Domains]

[SW|HTH hxlR-type domain] (aa 6-104) (according to UniProt)

The protein

Structure

[PDB|4A5M] ([[protein|HypR]], 55% identity) [pubmed|22238377]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A791 (ykvN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/791 NBRP B. subtilis, Japan]

BKE13760 (Δ[[gene|ykvN]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13760 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTAAAGCTCTCCATT, downstream forward: _UP4_TAGGATTGATGTAGCTGCTG

BKK13760 (Δ[[gene|ykvN]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13760 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCTAAAGCTCTCCATT, downstream forward: _UP4_TAGGATTGATGTAGCTGCTG

References

Research papers

22238377