SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:30 GMT+0100 (CET)2025-05-11 06:18:30

locus

BSU04210

BSU_04210

ec

outlinks

bsu

BSU04210

BSU_04210

aminos

MFTCKVNEHITIRLLEPKDAERLAELIIQNQQRLGKWLFFAENPSSADTYRETIIPDWRRQYADLNGIEAGLLYDGSLCGMISLHNLDQVNRKAEIGYWIAKEFEGKGIITAACRKLITYAFEELELNRVAICAAVGNEKSRAVPERIGFLEEGKARDGLYVNGMHHDLVYYSLLKREWEGEK

[SW|Categories] containing this gene/protein

[SW|general stress proteins (controlled by SigB)], [SW|poorly characterized/ putative enzymes]

Gene

Coordinates on the chromosome (coding sequence)

473,174 -> 473,725

The protein

Protein family

N-acetyltransferase domain (according to Swiss-Prot)

[SW|Acetyltransferase family] (according to UniProt)

Expression and Regulation

Operon

''[[protein|ydaD]]-[[protein|ydaE]]-[[protein|ydaF]]-[[protein|ydaG]]'' [Pubmed|10220166]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigB]] [Pubmed|10220166]

Expression and Regulation

Regulation

induced under stress conditions ([[protein|SigB]]) [Pubmed|10220166]

proteinLength

183

geneLength

552

Gene

Coordinates

473,174 → 473,725

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|N-acetyltransferase domain] (aa 10-176) (according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C088 (ydaF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2086 NBRP B. subtilis, Japan]

BKE04210 (Δ[[gene|ydaF]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCCTCGCCCTCTTTCC, downstream forward: _UP4_TAAAGAGCACACTTTCTTGT

BKK04210 (Δ[[gene|ydaF]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCCTCGCCCTCTTTCC, downstream forward: _UP4_TAAAGAGCACACTTTCTTGT