SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:32025-05-15 01:46:55

description

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

locus

BSU30450

BSU_30450

geneLength

876

879

product

ABC transporter (ATP-binding protein)

[SW|ABC transporter] (ATP-binding protein)

ec

outlinks

bsu

BSU30450

BSU_30450

The protein

Protein family

[SW|ABC transporter] family (according to Swiss-Prot)

[SW|ABC transporter superfamily] (according to UniProt)

Biological materials

Mutant

MGNA-A131 (ytrB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/131 NBRP B. subtilis, Japan]

GP3188 (Δ[[gene|ytrB]]), available in [SW|Jörg Stülke]'s lab

GP2646 Δ([[gene|ytrG]]-[[gene|ytrA]]-[[gene|ytrB]]-[[gene|ytrC]]-[[gene|ytrD]]-[[gene|ytrE]]-[[gene|ytrF]])::''ermC'', available in [SW|Jörg Stülke]'s lab

MGNA-A131 (ytrB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/131 NBRP B. subtilis, Japan]

BKE30450 (Δ[[gene|ytrB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30450 BGSC] and in [SW|Jörg Stülke]'s lab, [Pubmed|28189581], upstream reverse: _UP1_GTTCAATCATTTTTTTTGCC, downstream forward: _UP4_AGATGGTAGACCGAGGTCTC

BKK30450 (Δ[[gene|ytrB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTTCAATCATTTTTTTTGCC, downstream forward: _UP4_AGATGGTAGACCGAGGTCTC

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|ABC transporter domain] (aa 2-227) (according to UniProt)

The protein

Structure

[PDB|1VPL] (from Thermotoga maritima, 31% identity)