SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:32 GMT+0100 (CET)2025-05-11 22:46:18

locus

BSU13790

BSU_13790

ec

outlinks

bsu

BSU13790

BSU_13790

aminos

MFQMSYYYSGLGWDFIQHVDQTNGVLNVVSPDFFYIRKDGSLLLRSANPDVIKALHRRKLKVVPFLSNHWDQDLGRFALMNRVLLAKQISHAIEELDLDGVNIDIENLTEKDRNLFTDFIRLVRKSIPRHKEVSVAVAANPFGWTKGWHGSYDYEYLAKYADYLMVMAYDESRLAGPTASVGWVEKSIQYVLTQKISPQKLVLGLPFYGRCWMEGQSASQAIPLYLVVSKKA

[SW|Categories] containing this gene/protein

[SW|sporulation proteins], [SW|poorly characterized/ putative enzymes]

Gene

Coordinates on the chromosome (coding sequence)

1,445,638 -> 1,446,336

The protein

Protein family

glycosyl hydrolase 18 family (according to Swiss-Prot)

[SW|Glycosyl hydrolase 18 family] (according to UniProt)

Expression and Regulation

Operon

''[[protein|ykvP]]-[[protein|ykvQ]]'' [Pubmed|11011148]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigK]] [Pubmed|11011148,15699190]

Expression and Regulation

Regulation

expressed late during sporulation in the mother cell ([[protein|SigK]]) [Pubmed|11011148,15699190]

proteinLength

232

geneLength

699

Gene

Coordinates

1,445,638 → 1,446,336

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|5JH8] (from Chromobacterium violaceum, 26% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A793 (ykvQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/793 NBRP B. subtilis, Japan]

BKE13790 (Δ[[gene|ykvQ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTCATAACCCCTTCATC, downstream forward: _UP4_TCTCAAGCCATTCCCCTTTA

BKK13790 (Δ[[gene|ykvQ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTCATAACCCCTTCATC, downstream forward: _UP4_TCTCAAGCCATTCCCCTTTA