SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:34 GMT+0100 (CET)2025-05-22 13:00:57

locus

BSU19550

BSU_19550

ec

outlinks

bsu

BSU19550

BSU_19550

aminos

MTNTLDVLKARASVKEYDTNAPISKEELTELLDLATKAPSAWNLQHWHFTVFHSDESKAELLPVAYNQKQIVESSAVVAILGDLKANENGEEVYAELASQGYITDEIKQTLLGQINGAYQSEQFARDSAFLNASLAAMQLMIAAKAKGYDTCAIGGFNKEQFQKQFDISERYVPVMLISIGKAVKPAHQSNRLPLSKVSTWL

[SW|Categories] containing this gene/protein

[SW|electron transport/ other], [SW|resistance against oxidative and electrophile stress]

Gene

Coordinates on the chromosome (coding sequence)

2,127,813 -> 2,128,421

The protein

Protein family

type A lantibiotic family (according to Swiss-Prot)

[SW|nitroreductase family] (according to UniProt)

Expression and Regulation

Regulation

induced by thiol-reactive compounds (catechol, menaquinone) ([[protein|YodB]]) [Pubmed|18208493]

Expression and Regulation

Regulatory mechanism

[[protein|YodB]]: transcription repression [Pubmed|18208493]

proteinLength

202

geneLength

609

Gene

Coordinates

2,127,813 → 2,128,421

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B434 (yodC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1433 NBRP B. subtilis, Japan]

BKE19550 (Δ[[gene|yodC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGTGTTTCCTCCTTCGG, downstream forward: _UP4_TAAGGATATGAAAAACCTTA

BKK19550 (Δ[[gene|yodC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19550 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAGTGTTTCCTCCTTCGG, downstream forward: _UP4_TAAGGATATGAAAAACCTTA