2017-06-06 08:58:17Sat Jun 25 2016 16:04:17 GMT+0200 (CEST)
proteinLength
249
geneLength
747
function
cleaves both 5- and 3-sites of the small cytoplasmic RNA precursor (scr)
cleaves both 5- and 3-sites
of the small cytoplasmic RNA precursor (scr)
Gene
Coordinates
1,665,710 → 1,666,459
Gene
Phenotypes of a mutant
essential [Pubmed|23300471,12682299,11123676]
the ''[[gene|rnc]]'' gene can be deleted in strains cured of the [SW|Skin element] and [[SPß prophage]] (or upon deletion of the toxin genes ''[[gene|txpA]]'' and ''[[gene|yonT]]'') [Pubmed|23300471]
essential [Pubmed|23300471,12682299,11123676]
the ''[[protein|rnc]]'' gene can be deleted in strains cured of the [SW|Skin element] and [[SPß prophage]] (or upon deletion of the toxin genes ''[[protein|txpA]]'' and ''[[protein|yonT]]'') [Pubmed|23300471]
The protein
Catalyzed reaction/ biological activity
Endonucleolytic cleavage of double-stranded RNA to 5'-phosphomonoester (according to Swiss-Prot)
cleaves both 5'- and 3'-sites of the small cytoplasmic RNA precursor (''[[gene|scr]]'')
degradation of ''[[gene|txpA]]'' mRNA-[[protein|FFCE5AD9E04E6D5F7970E89781C545E7DBDF45F0]] RNA duplex (encoded on the [SW|Skin element]) [Pubmed|23300471]
degradation of ''[[gene|yonT]]'' mRNA-''[[gene|SR6]]'' RNA duplex (encoded on the [[SP-beta prophage]]) [Pubmed|23300471]
degradation of the ''[[gene|roxS]]''-''[[gene|ytdI]]'' and ''[[gene|roxS]]-[[gene|sucC]]'' RNA duplexes [Pubmed|25643072]
Endonucleolytic cleavage of double-stranded RNA to 5'-phosphomonoester (according to Swiss-Prot)
cleaves both 5'- and 3'-sites of the small cytoplasmic RNA precursor (''[[protein|scr]]'')
degradation of ''[[protein|txpA]]'' mRNA-[[protein|RatA]] RNA duplex (encoded on the [SW|Skin element]) [Pubmed|23300471]
degradation of ''[[protein|yonT]]'' mRNA-''[[protein|as-yonT]]'' RNA duplex (encoded on the [[SP-beta prophage]]) [Pubmed|23300471]
degradation of the ''[[protein|roxS]]''-''[SW|ppnKB]'' and ''[[protein|roxS]]-[[protein|sucC]]'' RNA duplexes [Pubmed|25643072]
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
[SW|Categories] containing this gene/protein
[SW|RNases], [SW|translation], [SW|protein secretion], [SW|essential genes]
Gene
Coordinates on the chromosome (coding sequence)
1,665,710 -> 1,666,459
Expression and Regulation
Operon
''[[protein|rnc]]-[[protein|smc]]-[[protein|ftsY]]'' [Pubmed|11021934]
Expression and Regulation
[SW|Sigma factor]
[[protein|SigA]] [Pubmed|11021934]
Expression and Regulation
Regulation
[[protein|RelA]] dependent downregulation (Class I) during stringent response [Pubmed|11948165]