SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:35 GMT+0100 (CET)2025-05-28 18:44:15

locus

BSU30150

BSU_30150

ec

outlinks

bsu

BSU30150

BSU_30150

aminos

MGGFMKRSQYKFYYKLITFFCLLSTIPVILVGLFSYEHSQKTAISNVSEEKFDTLQQTQQSIEHILKTVDHSLTHYVSSPPLLRTLSEPLHSDQFQIYNQVNQELNYLQSFDTDLSNMTLVSYTKKWYMNNSGLYRLNTDTLHEAASAYTKQKASRSYWTLEENNHLISTKEGTAENCRYNINLIKQLPLNSTNTKGLAAASIPSCSLVKNMPGYSNANNLFIIDEKGLIILHNNMSDVGESLHNDGFVQKVLAQTANSGQFETVIDRIHYKVTYQKSDYNAWTYFSLVSLPELKKEAKSIGWITFAVCLILLTLSLLFSWLGSRHFYKPIRVLYESFARHGAIQEKQQPPQNEFELIEQSFKQLKDRNDDLEETMKQQATHLQQYFMVRLMLGKLTDEEVDNRFESLGLKQNWRHLALLVLQIDTLNHTPYEKKDMDLLLFAVNSLIERNIPTDKHLAPAVVDKQQATILINQSGTKEEFMAELNETARMIQEKAEAELQLSVSIGISQPFDVLTKAKTAYAEGSEALKYRLKAENKSIIFYEDLDQKKTFKTHFPKQLQHELFDAVKAGDKEKADKCLHAILQAIFTQNTNPYQFQIAIARFLNHVIELMHVLGIELFELEENKMLYDQIFELKTFEDTENWLKNEFIDPMTDKVNARADAQYKNISDNIIHIIHHEFESELTLDEIARRLHYNPNYLSSIFKKEMGISFSEYVSSYRHHMAKSWLAETDMAVKDIAEKLKYKNSQNFIRSFKKLEGITPGNYRQQKRSM

[SW|Categories] containing this gene/protein

[SW|transcription factors and their control], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,083,441 -> 3,085,759

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

The protein

[SW|Interactions]

[[protein|RmgR]] is a member of a suspected group of hubs proteins that were suggested to be involved in a large number of [SW|interactions] [Pubmed|21630458]

proteinLength

772

geneLength

2319

Gene

Coordinates

3,083,441 → 3,085,759

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|HTH araC/xylS-type domain] (aa 670-768) (according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A808 (ytdP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/808 NBRP B. subtilis, Japan]

BKE30150 (Δ[[gene|rmgR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATAACATCCACTTC, downstream forward: _UP4_TAAAAAACCCAAAACCGCTT

BKK30150 (Δ[[gene|rmgR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATAACATCCACTTC, downstream forward: _UP4_TAAAAAACCCAAAACCGCTT