SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:32 GMT+0100 (CET)2025-05-30 03:29:23

locus

BSU13820

BSU_13820

ec

outlinks

bsu

BSU13820

BSU_13820

aminos

MTTKFTALAVFLLCFMPAAKIEHTQASLLSAKKTKHEEAKWLTHIDRNTNESFPSLSADKDKKIKPIKLSAHTEKKEKDKPDKTNDEKETYTQSEKELLSRLVHAEAKGESYKGKVAVASVVLNRTEKKGFPDTIRGVIYQKNAFEPVANGSINQKPDKESIEAAEEALSSKNRETDAIFFYNPKTASDNWIRSRKIVEKIGRHVFAV

[SW|Categories] containing this gene/protein

[SW|cell wall degradation/ turnover]

Gene

Coordinates on the chromosome (coding sequence)

1,448,506 -> 1,449,132

Expression and Regulation

Operon

''ykvT'' (according to [http://dbtbs.hgc.jp/COG/prom/ykvT.html DBTBS])

Expression and Regulation

Regulatory mechanism

[[protein|WalR]]: transcription activation [Pubmed|12950927]

References

12950927, 23199363

12950927, 23199363, 22777830

proteinLength

208

geneLength

627

Gene

Coordinates

1,448,506 → 1,449,132

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|4FET] (from B. anthracis, corresponds to aa 70 ... 207, 35% identity) [pubmed|22777830]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A054 (ykvT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/54 NBRP B. subtilis, Japan]

BKE13820 (Δ[[gene|ykvT]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAGTTTCCTCCTTAAA, downstream forward: _UP4_TAAGCATAGAAGAGACAATT

BKK13820 (Δ[[gene|ykvT]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATACAGTTTCCTCCTTAAA, downstream forward: _UP4_TAAGCATAGAAGAGACAATT