2017-8-11 16:0:32025-05-29 11:46:14
title
ydcH
pamR
_ec
description
unknown
[SW|MarR family|MarR/DUF24 family] transcription factor
locus
BSU04770
BSU_04770
geneLength
441
444
function
unknown
control of the [[gene|ydcF]]-[[gene|ydcG]]-[[gene|pamR ]]operon
product
unknown
[SW|MarR family|MarR/DUF24 family] transcription factor
names
ydcH
pamR
ydcH
outlinks
bsu
BSU04770
BSU_04770
Biological materials
Mutant
MGNA-C096 (ydcH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2094 NBRP B. subtilis, Japan]
MGNA-C096 (ydcH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2094 NBRP B. subtilis, Japan]
BKE04770 (Δ[[gene|pamR]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGGGCTTGTGTTCGGACCGC, downstream forward: _UP4_TAAAGATACGGGCAGCGCCA
BKK04770 (Δ[[gene|pamR]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGGGCTTGTGTTCGGACCGC, downstream forward: _UP4_TAAAGATACGGGCAGCGCCA
The protein
Protein family
[SW|MarR family|MarR/DUF24 family]
The protein
Paralogous protein(s)
[[this]]
The protein
[SW|Domains]
[SW|HTH marR-type domain] (aa 11-147) (according to UniProt)
The protein
Structure
[PDB|3BPX] ([[protein|MarR ]]from Methanothermobacter thermautotrophicus, 28% identity, aa 29 - 137) [pubmed|18272181]
References
Research papers