SubtiBank SubtiBank
Version comparison:

2018-04-02 15:20:342025-05-22 20:38:48

description

similar to histidine permase

uncharacterized amino acid permase

locus

BSU02400

BSU_02400

geneLength

1410

1413

outlinks

bsu

BSU02400

BSU_02400

The protein

Structure

[PDB|5OQT] (23% identity)

[PDB|5OQT] (arginine transporter from Geobacillus kaustophilus, 23% identity) [pubmed|29416041]

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

Biological materials

Mutant

MGNA-B940 (ybgF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1939 NBRP B. subtilis, Japan]

BKE02400 (Δ[[gene|ybgF]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTCCAACTTTCTA, downstream forward: _UP4_TAAAAAGAACCTGCCTCCGG

BKK02400 (Δ[[gene|ybgF]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTCCAACTTTCTA, downstream forward: _UP4_TAAAAAGAACCTGCCTCCGG

GP3040 Δ[[gene|ybgF]]::''cat'', available in [SW|Jörg Stülke]'s lab [pubmed|32743959]

MGNA-B940 (ybgF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1939 NBRP B. subtilis, Japan]

BKE02400 (Δ[[gene|ybgF]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTCCAACTTTCTA, downstream forward: _UP4_TAAAAAGAACCTGCCTCCGG

BKK02400 (Δ[[gene|ybgF]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTTTTTCCAACTTTCTA, downstream forward: _UP4_TAAAAAGAACCTGCCTCCGG

The protein

Protein family

[SW|amino acid-polyamine-organocation (APC) superfamily] (according to UniProt)

References

Research papers

29416041