Tue Dec 13 2016 11:16:34 GMT+0100 (CET)2025-05-20 07:24:49
locus
BSU23920
BSU_23920
outlinks
bsu
BSU23920
BSU_23920
aminos
MNEHMDHFYTKRKQAEEGGGREKLAQQRQKGKLTARERIIFLLDQDSFIELHPFMESQVLTREQRMLGDGVVTGYGTIDGRSVYVFAQDFTVYGGALGETHARKICALMDLAAKNKAPIIGLNDSGGARIQEGVLSLDGYGHIFYRNVLYSGVIPQISVILGPCAGGAVYSPALTDFIFMAEQTGRMFITGPKVIEKVTGEQVDAESLGGAGIHNAVSGNAHFSGHTEKEVLTGVRKLLSYLPLNGRTTEPKPEKEASRPLLNRLVPADTTKPYDVRKVIRELADPQSFFEIQPFFAKNIVIGFARLGEKAIGIVASQPKHLAGSLTIDAADKAARFIRFCDAFDIPLLTVEDVPGFLPGIQQEHNGIIRHGAKLLFAYAEATVPKVTLIIRKAYGGAYVAMNSKAIGADLVFAWPNAEIAVMGPEGAASILYEKEIKASADPQKTKREKTAEYKKQNAGPYKAAACGMVDDIILPEESRGRLIQAFHMLTHKTEERPKKKHGNIPL
[SW|Categories] containing this gene/protein
[SW|poorly characterized/ putative enzymes]
Gene
Coordinates on the chromosome (coding sequence)
2,486,813 -> 2,488,336
The protein
Catalyzed reaction/ biological activity
ATP + propanoyl-CoA + HCO3- = ADP + phosphate + (S)-methylmalonyl-CoA (according to Swiss-Prot)
ATP + hydrogencarbonate + propanoyl-CoA --> (S)-methylmalonyl-CoA + ADP + H+ + phosphate (according to UniProt)
The protein
Protein family
accD/PCCB family (according to Swiss-Prot)
AccD/PCCB family (with [[protein|AccD]] and [[protein|YngE]], according to UniProt)
The protein
Paralogous protein(s)
[[protein|YngE]]
[[this]]
proteinLength
507
geneLength
1524
Gene
Coordinates
2,486,813 → 2,488,336
The protein
[SW|Domains]
CoA carboxyltransferase N-terminal domain (aa 1-254) (according to UniProt)
CoA carboxyltransferase C-terminal domain (aa 256-501) (according to UniProt)
The protein
Structure
[PDB|1VRG] (from Thermotoga maritima, 57% identity)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
MGNA-C387 (yqjD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2385 NBRP B. subtilis, Japan]
BKE23920 (Δ[[gene|yqjD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23920 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCGTGTAAAAATGATCCA, downstream forward: _UP4_CTTTAATATGGAGGGACTTA
BKK23920 (Δ[[gene|yqjD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23920 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTCGTGTAAAAATGATCCA, downstream forward: _UP4_CTTTAATATGGAGGGACTTA
References
Research papers