SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-04-13 09:57:43

locus

BSU07450

BSU_07450

ec

outlinks

bsu

BSU07450

BSU_07450

aminos

MTASQQQIQLARRPQGIPVHEDFRFETIPVPEPKQGEVLVKTLYVSVDPYMRGRMQDTKSYVEPFALDKALSGGVIAEVVSDGNHLKKGDIVIGNLSWQEFSAVSESALRKIDTSLAPASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLKAGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVSDPS

[SW|Categories] containing this gene/protein

[SW|poorly characterized/ putative enzymes]

Gene

Coordinates on the chromosome (coding sequence)

817,810 -> 818,829

Expression and Regulation

Operon

''[[protein|yfmI]]-[[protein|yfmJ]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfmIJ.html DBTBS])

Expression and Regulation

Regulation

expressed under conditions that trigger sporulation ([SW|Spo0A]) [Pubmed|14651647]

Expression and Regulation

Regulatory mechanism

[SW|Spo0A]: transcription activation [Pubmed|14651647]

proteinLength

339

geneLength

1020

Gene

Coordinates

817,810 → 818,829

The protein

Protein family

NADP-dependent oxidoreductase L4BD family (single member, according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|4B7C] (from ''Pseudomonas Aeruginosa'', 48% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-C241 (yfmJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2239 NBRP B. subtilis, Japan]

BKE07450 (Δ[[gene|yfmJ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCCTCCTATCAC, downstream forward: _UP4_TGAATGAAGATGAAAACGGG

BKK07450 (Δ[[gene|yfmJ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07450 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCATCCTCCTATCAC, downstream forward: _UP4_TGAATGAAGATGAAAACGGG