SubtiBank SubtiBank
Version comparison:

2017-07-25 15:47:04Fri Dec 04 2015 20:39:41 GMT+0100 (CET)

proteinLength

400

geneLength

1200

Gene

Coordinates

2,372,304 → 2,373,506

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

References

Reviews

18486479, 11893063, 11163353, 7900177, 19387555, 12859215, 11395405

18486479, 11893063, 11163353, 7900177, 19387555, 12859215

[SW|Categories] containing this gene/protein

[SW|biosynthesis/ acquisition of amino acids]

Gene

Coordinates on the chromosome (coding sequence)

2,372,304 -> 2,373,506

The protein

[SW|Interactions]

[[protein|TrpA]]-[[protein|TrpB]]

Expression and Regulation

Operon

''[[protein|aroF]]-[[protein|aroB]]-[[protein|aroH]]-[[protein|trpE]]-[[protein|trpD]]-[[protein|trpC]]-[[protein|trpF]]-[[protein|trpB]]-[[protein|trpA]]-[[protein|hisC]]-[[protein|tyrA]]-[[protein|aroE]]'' (according to [http://dbtbs.hgc.jp/COG/prom/trpEDCFBA-hisC-tyrA-aroE.html DBTBS])

''[[protein|trpE]]-[[protein|trpD]]-[[protein|trpC]]-[[protein|trpF]]-[[protein|trpB]]-[[protein|trpA]]-[[protein|hisC]]-[[protein|tyrA]]-[[protein|aroE]]'' [Pubmed|21815947]

''[[protein|trpE]]-[[protein|trpD]]-[[protein|trpC]]-[[protein|trpF]]-[[protein|trpB]]-[[protein|trpA]]'' [Pubmed|21815947]

Expression and Regulation

[SW|Sigma factor]

''[[protein|trpE]]'': [[protein|SigA]] [Pubmed|6436812]

Expression and Regulation

Regulation

not expressed if tryptophan is available ([[MtrB|TRAP]]) [Pubmed|1551827]

Expression and Regulation

Regulatory mechanism

[[MtrB|TRAP]]: binding to the mRNA in the presence of tryptophan, this results in transcription termination [Pubmed|8419914]

Expression and Regulation

Additional information

the mRNA of the ''[[protein|trpE]]-[[protein|trpD]]-[[protein|trpC]]-[[protein|trpF]]-[[protein|trpB]]-[[protein|trpA]]-[[protein|hisC]]-[[protein|tyrA]]-[[protein|aroE]]'' operon strongly accumulates upon depletion of [[rny|RNase Y]] [Pubmed|21815947]

the mRNA is substantially stabilized upon depletion of [[Rny|RNase Y]] [PubMed|21815947]