SubtiBank SubtiBank
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Mon Aug 31 2015 13:57:08 GMT+0200 (CEST)2025-05-10 13:49:07

description

ribose ABC transporter (ATP-binding protein)

ribose [SW|ABC transporter] (ATP-binding protein)

locus

BSU35940

BSU_35940

product

ribose ABC transporter (ATP-binding protein)

ribose [SW|ABC transporter] (ATP-binding protein)

outlinks

bsu

BSU35940

BSU_35940

syns

[SW|Categories] containing this gene/protein

[SW|ABC transporters], [SW|utilization of specific carbon sources], [SW|membrane proteins]

The protein

Catalyzed reaction/ biological activity

ATP + H2O + monosaccharide(Out) = ADP + phosphate + monosaccharide(In) (according to Swiss-Prot)

ATP + D-ribose + H2O --> ADP + D-ribose + H+ + phosphate (according to UniProt)

The protein

[SW|Interactions]

[[protein|RbsA]](2)-([[protein|RbsC]]-[[protein|RbsD]])-[[protein|RbsB]] [Pubmed|10092453]

Expression and Regulation

Operon

''[[protein|rbsR]]-[[protein|rbsK]]-[[protein|rbsD]]-[[protein|rbsA]]-[[protein|rbsC]]-[[protein|rbsB]]'' [Pubmed|7921236]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|7511775]

Expression and Regulation

Regulation

repressed by glucose ([[protein|CcpA]]) [Pubmed|7921236]

expressed upon transition into the stationary phase ([[protein|AbrB]]) [Pubmed|7592460]

Expression and Regulation

Regulatory mechanism

[[protein|CcpA]]: transcription repression [Pubmed|7921236]

[[protein|AbrB]]: transcription activation [Pubmed|7592460]

References

10092453, 16872404, 7511775, 7592460, 7921236

10092453, 16872404, 7511775, 7592460, 7921236, 12554933

proteinLength

493

geneLength

1482

Gene

Coordinates

3,703,682 3,705,163

The protein

Protein family

[SW|ABC transporter superfamily] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

2 [SW|ABC transporter domain]s (aa 3-239, aa 246-493) (according to UniProt)

The protein

Structure

[PDB|1G9X] (from Methanocaldococcus jannaschii, 36% identity) [pubmed|12554933]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE35940 ([[gene|rbsA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATCTGCATGTTTCATCTTC, downstream forward: _UP4_ACACTTGCCACGGGAGGGCG

BKK35940 ([[gene|rbsA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATCTGCATGTTTCATCTTC, downstream forward: _UP4_ACACTTGCCACGGGAGGGCG