SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:31 GMT+0100 (CET)2025-05-24 08:45:41

locus

BSU07750

BSU_07750

ec

outlinks

bsu

BSU07750

BSU_07750

aminos

MERLLVWIEHISDWLWGPPLIILLTGTGLYFTILLKGFQFRYPLYIFKQTIGSVGKKPKGEGTVTPLQALTSALSSTIGAANIVGVPAAIMFGGPGAVFWMWLIALFAMAIKFSESVLAVHYREKNEQGEYVGGPMYYITKGLRMKWLGVFFSVALIVELIPSIMVQGNSVSVSLAETFSFNKIYAGIGIAFLIGLVVIGGVKRIGKVTEFVVPLMAGAYAGAGLLIVLMNLSSVPAFFSLVFSNAFTSSSAVGGFAGAALAETVRWGFARGLYSNEAGMGTAPIAHAAAMTDHPVRQGFWSVIGIVIDTLIICTTTAFIVLASGVWTGKNASNDPAALTTAAFQHYFGSGGGYFVSVSLVFFVVSTIMVVIFYGVKQAEFLFGRLAGHVIKFVYLAAIIIGAAGGAKAIWGVLDLALVFIVVPNVIALLLLSRKVKALYTEFFTSEQYYLKDIRKTKQKPVYPTKEAKNS

[SW|Categories] containing this gene/protein

[SW|transporters/ other], [SW|general stress proteins (controlled by SigB)], [SW|resistance against oxidative and electrophile stress], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

844,770 -> 846,185

Expression and Regulation

[SW|Sigma factor]

[[protein|SigB]] [Pubmed|15805528]

Expression and Regulation

Regulation

induced by stress ([[protein|SigB]]) [Pubmed|15805528]

[[protein|Abh]] and [[protein|AbrB]]: synergistic transcription repression[Pubmed|20817675]

References

15805528, 20817675, 22582280

15805528, 20817675, 22582280, 30659158

proteinLength

471

geneLength

1416

Gene

Coordinates

844,770 846,185

The protein

Protein family

[SW|Alanine or glycine:cation symporter (AGCS) (TC 2.A.25) family] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|6CSE] (sodium/alanine symporter from Methanococcus maripaludis S2, 37% identity) [pubmed|30659158]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

GP3557 (Δ[[gene|yflA]]::phleo), available in [SW|Jörg Stülke]'s lab

MGNA-C257 (yflA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2255 NBRP B. subtilis, Japan]

BKE07750 ([[gene|yflA]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07750 BGSC] and in [SW|Jörg Stülke]'s lab, [Pubmed|28189581], upstream reverse: _UP1_CATCCCATCACCCTTTTTTC, downstream forward: _UP4_TCCTAGTGTTTTGCTTTTGC

BKK07750 ([[gene|yflA]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07750 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCCATCACCCTTTTTTC, downstream forward: _UP4_TCCTAGTGTTTTGCTTTTGC