SubtiBank SubtiBank
Version comparison:

Wed Aug 31 2016 17:48:31 GMT+0200 (CEST)2025-05-15 10:14:47

locus

BSU16590

BSU_16590

ec

outlinks

bsu

BSU16590

BSU_16590

[SW|Categories] containing this gene/protein

[SW|translation]

Gene

Coordinates on the chromosome (coding sequence)

1,731,776 -> 1,732,246

The protein

Protein family

UPF0090 family (according to Swiss-Prot)

RimP family (single member, according to UniProt)

Expression and Regulation

Operon

''[[protein|ylxS]]-[[protein|nusA]]-[[protein|ylxR]]-[[protein|ylxQ]]-[[protein|infB]]-[[protein|ylxP]]-[[protein|rbfA]]'' [Pubmed|8491709]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|8491709]

Expression and Regulation

Regulation

[[protein|RelA]] dependent downregulation (Class I) during stringent response [Pubmed|11948165]

References

11948165, 8491709, 20525796, 19150615, 11493012

11948165, 8491709, 20525796, 19150615, 11493012, 27120414

proteinLength

156

geneLength

471

Gene

Coordinates

1,731,776 1,732,246

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE16590 ([[gene|ylxS]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE16590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTTCCTCCTTGTGC, downstream forward: _UP4_TAATGAATACAAATGTTTTA

BKK16590 ([[gene|ylxS]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTTCCTCCTTGTGC, downstream forward: _UP4_TAATGAATACAAATGTTTTA