SubtiBank SubtiBank
Version comparison:

Mon Aug 31 2015 13:52:50 GMT+0200 (CEST)2025-05-23 04:43:18

locus

BSU06060

BSU_06060

ec

outlinks

bsu

BSU06060

BSU_06060

syns

[SW|Categories] containing this gene/protein

[SW|DNA restriction/ modification], [SW|essential genes], [SW|prophage 3]

Gene

Phenotypes of a mutant

essential [Pubmed|12682299], mutation is only possible in a ''[[protein|ydiR]]'', ''[[protein|ydiS]]'', or ''[[protein|ydjA]]'' background (''i. e.'', in the absence of the BsuM DNA restriction system) [Pubmed|11751814]

essential [Pubmed|12682299], mutation is only possible in a ''[[gene|ydiR]]'', ''[[gene|ydiS]]'', or ''[[gene|ydjA]]'' background (''i. e.'', in the absence of the BsuM DNA restriction system) [Pubmed|11751814]

Expression and Regulation

Operon

''[[protein|ydiO]]-[[protein|ydiP]]'' [Pubmed|11751814]

Expression and Regulation

Regulation

induced by DNA damage ([[protein|LexA]]) [Pubmed|16267290]

Expression and Regulation

Regulatory mechanism

[[protein|LexA]]: transcription repression [Pubmed|16267290]

proteinLength

427

geneLength

1284

Gene

Coordinates

655,223 656,506

The protein

Catalyzed reaction/ biological activity

2'-deoxycytidine in DNA + S-adenosyl-L-methionine --> 5-methyl-2'-deoxycytidine in DNA + H+ + S-adenosyl-L-homocysteine (according to UniProt)

The protein

Protein family

[SW|Methyltransferase superfamily] (according to UniProt)

[SW|class I-like SAM-binding methyltransferase superfamily] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

SAM-dependent MTase C5-type domain (aa 84-427) (according to UniProt)

The protein

Structure

[PDB|3G7U] (from E. coli phage, 28% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]