SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:34 GMT+0100 (CET)2025-05-29 12:47:32

locus

BSU21800

BSU_21800

ec

outlinks

bsu

BSU21800

BSU_21800

aminos

MVRYSLLVVYIVYMLLKNMKQLFNQTMLDPRLSYKKQMALVYEQPKAFLEGCIGISGSVVTIHQPEPIPHGPVLYVHPRLRLAELALIAGYIEEPAGFIANPKVFRLPFIGQWLDRMDVISDGDSEKVYEDVTKQLEKGQSLILSLDGSIDPVELAARYHLPLVMVETKGTDNMQNGSFFKRLKPADIELSFSKAYIPANEKQLRA

[SW|Categories] containing this gene/protein

[SW|membrane proteins], [SW|proteins of unknown function]

Gene

Coordinates on the chromosome (coding sequence)

2,295,982 -> 2,296,602

The protein

Protein family

pseudouridine synthase rsuA family (according to Swiss-Prot)

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

Expression and Regulation

Operon

''ypkP'' (according to [http://dbtbs.hgc.jp/COG/prom/ypkP.html DBTBS])

proteinLength

206

geneLength

621

Gene

Coordinates

2,295,982 2,296,602

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A895 (ypkP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/895 NBRP B. subtilis, Japan]

BKE21800 ([[gene|ypkP]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTAGAAGGCTGTAGCGAA, downstream forward: _UP4_TAAAAAAGCGCAGTCGTGAA

BKK21800 ([[gene|ypkP]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTAGAAGGCTGTAGCGAA, downstream forward: _UP4_TAAAAAAGCGCAGTCGTGAA