SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:33 GMT+0100 (CET)2025-05-11 13:31:28

locus

BSU16860

BSU_16860

ec

outlinks

bsu

BSU16860

BSU_16860

aminos

60-MONOMERputativeprocessingprotease1758314..1759600BacillussubtilissubtilisMIKPIEYEQLQETLYHEKMSNGLDVYVLPKKGFNKTYAVFTTKYGSIDNRFVPLGKNEMVHVPDGIAHFLEHKLFEKADGDVFQDFSKQGASANAFTSFTRTAYLFSSTSNVERNLETLIDFVQDPYFTEKTVEKEKGIIGQEINMYDDNPDWRLYFGVIENMYKEHPVRIDIAGTVESISHITKDLLYECYETFYHPSNMLLFIVGPVDPEAIISQVRENQGKKPYTDQPEIKREEVKEQEAVFRKEKEIKMNVQGPKCLVGLKSKNPFKLGKELLKHELSMNLLLEALFGKSSAQYESLYEKGYIDETFSFDFTAEYGFGFAAIGGDTPEPDQLAEDISSMLLRAGELITAEKIELARKKKIGTFLKALNSPEYIANQFTRYAFLDMSLFDVVTVLEQITLEDVQNVIQEEIAADRLTVCKVVPKS

[SW|Categories] containing this gene/protein

[SW|poorly characterized/ putative enzymes], [SW|sporulation proteins]

Gene

Coordinates on the chromosome (coding sequence)

1,758,314 -> 1,759,600

Expression and Regulation

Operon

''[[protein|ymfD]]-[[protein|ymfF]]-[[protein|ymfH]]'' [Pubmed|18502870]

Expression and Regulation

Regulatory mechanism

[[protein|Mta]]: transcription activation [Pubmed|18502870]

proteinLength

428

geneLength

1287

Gene

Coordinates

1,758,314 1,759,600

The protein

Protein family

[SW|Peptidase M16 family] (according to UniProt)

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|4XEA] (from Alicyclobacillus acidocaldarius, 43% identity)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-A025 (ymfH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/25 NBRP B. subtilis, Japan]

BKE16860 ([[gene|ymfH]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE16860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTGTTCATATTCGATTGGTT, downstream forward: _UP4_TAAACAAAACATCCCTCCAG

BKK16860 ([[gene|ymfH]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK16860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTGTTCATATTCGATTGGTT, downstream forward: _UP4_TAAACAAAACATCCCTCCAG