SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:30 GMT+0100 (CET)2025-05-23 23:12:06

locus

BSU03240

BSU_03240

ec

outlinks

bsu

BSU03240

BSU_03240

aminos

MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKDDEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF

[SW|Categories] containing this gene/protein

[SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)], [SW|membrane proteins]

Gene

Coordinates on the chromosome (coding sequence)

349,996 -> 350,853

The protein

Protein family

UPF0703 family (according to Swiss-Prot)

UPF0703 family (single member, according to UniProt)

The protein

[SW|Localization]

cell membrane (according to Swiss-Prot)

cell membrane (according to UniProt)

Expression and Regulation

[SW|Sigma factor]

[[protein|SigM]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18179421 Pubmed]

Expression and Regulation

Regulation

expression is reduced in a [[protein|SigV]] mutant [Pubmed|21926231]

proteinLength

285

geneLength

858

Gene

Coordinates

349,996 350,853

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B995 (ycgQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1994 NBRP B. subtilis, Japan]

BKE03240 ([[gene|ycgQ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE03240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCAATCACCCCTTTACC, downstream forward: _UP4_TAAGTGAAGACGAAACCAGT

BKK03240 ([[gene|ycgQ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK03240 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCAATCACCCCTTTACC, downstream forward: _UP4_TAAGTGAAGACGAAACCAGT