SubtiBank SubtiBank
Version comparison:

Mon Aug 31 2015 13:55:44 GMT+0200 (CEST)2025-05-23 19:39:51

locus

BSU25840

BSU_25840

ec

outlinks

bsu

BSU25840

BSU_25840

syns

[SW|Categories] containing this gene/protein

[SW|phosphorelay], [SW|quorum sensing], [SW|Skin element], [SW|short peptides]

The protein

Protein family

phr family (according to Swiss-Prot)

[SW|phr family] (according to UniProt)

Expression and Regulation

Operon

''[[protein|rapE]]-[[protein|phrE]]'' [Pubmed|11466295,10629174]

''[[protein|phrE]]'' [Pubmed|11466295]

Expression and Regulation

[SW|Sigma factor]

''[[protein|phrE]]'': [[protein|SigA]] [Pubmed|11466295], [[protein|SigH]] [Pubmed|11466295]

Expression and Regulation

Regulation

repressed by glucose (10-fold) ([[protein|CcpA]]) [Pubmed|12850135]

repressed during growth in the presence of branched chain amino acids ([[protein|CodY]]) [Pubmed|12618455]

[[protein|ComA]]: transcription activation [Pubmed|10629174]

Expression and Regulation

Regulatory mechanism

[[protein|CcpA]]: transcription repression

[[protein|CodY]]: transcription repression [Pubmed|12618455]

[[protein|AbrB]]: transcription repression [Pubmed|20817675]

proteinLength

44

geneLength

135

Gene

Coordinates

2,660,330 2,660,464

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

BKE25840 ([[gene|phrE]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE25840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AACGGCGGATAAACTGATAA, downstream forward: _UP4_TAATTCGATAAACAACATTA

BKK25840 ([[gene|phrE]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK25840 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AACGGCGGATAAACTGATAA, downstream forward: _UP4_TAATTCGATAAACAACATTA