SubtiBank SubtiBank
Version comparison:

2017-11-16 13:43:392025-05-10 21:03:58

locus

BSU31960

BSU_31960

geneLength

7134

7137

outlinks

bsu

BSU31960

BSU_31960

Gene

Coordinates

3,280,519 → 3,287,655

3,280,519 3,287,655

The protein

Protein family

ATP-dependent AMP-binding enzyme family (according to Swiss-Prot)

[SW|ATP-dependent AMP-binding enzyme family] (according to UniProt)

The protein

Paralogous protein(s)

shares highly conserved domains of more than 1,000 amino acids with: [[protein|DhbF]], [[protein|PksJ]], [[protein|PksN]], [[protein|PpsA]], [[protein|PpsB]], [[protein|PpsC]], [[protein|PpsD]], [[protein|PpsE]], [[protein|SrfAA]], [[protein|SrfAB]], [[protein|SrfAC]]

[[this]]

Biological materials

Mutant

MGNA-A063 (yukL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/63 NBRP B. subtilis, Japan]

BKE31960 (Δ[[gene|dhbF]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGTTTGTTTACCCTCC, downstream forward: _UP4_AATAAATAAGGGAGGAGAAA

BKK31960 (Δ[[gene|dhbF]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGTTTGTTTACCCTCC, downstream forward: _UP4_AATAAATAAGGGAGGAGAAA

MGNA-A063 (yukL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/63 NBRP B. subtilis, Japan]

BKE31960 ([[gene|dhbF]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGTTTGTTTACCCTCC, downstream forward: _UP4_AATAAATAAGGGAGGAGAAA

BKK31960 ([[gene|dhbF]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31960 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGTTTGTTTACCCTCC, downstream forward: _UP4_AATAAATAAGGGAGGAGAAA

References

11112781, 11790741, 12354229, 18763711, 17218307, 8921902, 8550523, 20817675, 21815947, 24223955, 26110430, 18583577

11112781, 11790741, 12354229, 18763711, 17218307, 8921902, 8550523, 20817675, 21815947, 24223955, 26110430, 18583577, 29133393, 29914988

The protein

[SW|Domains]

2 [SW|Carrier domain]s (aa 961-1036, aa 2036-2111) (according to UniProt)