SubtiBank SubtiBank
Version comparison:

2018-05-09 12:56:212025-05-25 08:34:15

locus

BSU23210

BSU_23210

geneLength

591

594

essential

yes

no

names

scpB

ypuH

scpB

ypuH

spcB

outlinks

bsu

BSU23210

BSU_23210

Gene

Coordinates

2,425,248 → 2,425,841

2,425,248 2,425,841

The protein

Protein family

scpB family (according to Swiss-Prot)

scpB family (single member, according to UniProt)

The protein

[SW|Localization]

nucleoid (Multiple) [Pubmed|16479537]

the [SW|condensin] ([[protein|Smc]])2-[[protein|ScpA]]-[[protein|ScpB]] complex is loaded by [[protein|ParB]] to ''parS'' centromeric sites adjacent to the replication origin, travels then from the origin to the terminus at rates >50 kb per minute [Pubmed|28154080,24440393,23475963]

nucleoid (Multiple) [Pubmed|16479537]

the [SW|condensin] ([[protein|Smc]])2-[[protein|ScpA]]-[[protein|ScpB]] complex is loaded by [[protein|ParB]] to ''parS'' centromeric sites adjacent to the replication origin, travels then from the origin to the terminus at rates >50 kb per minute [Pubmed|28154080,24440393,23475963]

Biological materials

Mutant

MGNA-A105 (ypuH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/105 NBRP B. subtilis, Japan]

BKE23210 (Δ[[gene|scpB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATAGCTTTCCAATTCA, downstream forward: _UP4_TAGAAGTTTAATGAATCGCG

BKK23210 (Δ[[gene|scpB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATAGCTTTCCAATTCA, downstream forward: _UP4_TAGAAGTTTAATGAATCGCG

MGNA-A105 (ypuH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/105 NBRP B. subtilis, Japan]

BKE23210 ([[gene|scpB]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATAGCTTTCCAATTCA, downstream forward: _UP4_TAGAAGTTTAATGAATCGCG

BKK23210 ([[gene|scpB]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAATAGCTTTCCAATTCA, downstream forward: _UP4_TAGAAGTTTAATGAATCGCG

References

Reviews

22933559, 22934648, 24118085, 25460803, 26706151

22933559, 22934648, 24118085, 25460803, 26706151, 29182912, 27075410

References

Original publications

12100548, 12065423, 12421306, 22385855, 16479537, 19450516, 12897137, 7934830, 11948165, 23353789, 24440399, 24440393, 25071173, 25557547, 25951515, 26253537, 23475963, 26295962, 26725510, 26904953, 28189581, 28154080, 28286005, 28689660

12100548, 12065423, 12421306, 22385855, 16479537, 19450516, 12897137, 7934830, 11948165, 23353789, 24440399, 24440393, 25071173, 25557547, 25951515, 26253537, 23475963, 26295962, 26725510, 26904953, 28189581, 28154080, 28286005, 28689660, 30192981, 31201090, 31175837, 32250245

The protein

Paralogous protein(s)

[[this]]