SubtiBank SubtiBank
Version comparison:

2017-05-17 11:12:482025-05-20 12:49:27

description

dTDP -glucose-4,6-dehydratase, spore coat polysaccharide synthesis

dTDP -glucose-4,6-dehydratase

locus

BSU37830

BSU_37830

geneLength

945

948

function

rhamnose biosynthesis, spore coat polysaccharide synthesis

rhamnose biosynthesis, spore crust polysaccharide synthesis

outlinks

bsu

BSU37830

BSU_37830

Gene

Coordinates

3,884,292 → 3,885,239

3,884,292 3,885,239

The protein

Catalyzed reaction/ biological activity

dTDP-glucose -→ dTDP-4-dehydro-6-deoxyglucose [Pubmed|22960854]

dTDP-glucose - dTDP-4-dehydro-6-deoxyglucose [Pubmed|22960854]

The protein

Protein family

sugar epimerase family (according to Swiss-Prot)

[SW|NAD(P)-dependent epimerase/dehydratase family] (according to UniProt)

References

9353933, 15383836, 22960854, 25239894, 26577401

9353933, 15383836, 22960854, 25239894, 26577401, 31235516, 32817102

Gene

Phenotypes of a mutant

production of spores lacking a visible crust [pubmed|31235516]

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|6BI4] (from B. anthracis, 50% identity)

Biological materials

Mutant

BKE37830 ([[gene|spsJ]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37830 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTAATTAAATATGATTTTG, downstream forward: _UP4_AATGACCGATGAGAAGGTGA

BKK37830 ([[gene|spsJ]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37830 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGTAATTAAATATGATTTTG, downstream forward: _UP4_AATGACCGATGAGAAGGTGA