SubtiBank SubtiBank
Version comparison:

2017-8-11 16:0:32025-05-16 09:25:06

locus

BSU28430

BSU_28430

geneLength

759

762

ec

outlinks

bsu

BSU28430

BSU_28430

Gene

Coordinates

2,905,571 → 2,906,332

2,905,571 2,906,332

The protein

Catalyzed reaction/ biological activity

Succinate acceptor = fumarate reduced acceptor (according to Swiss-Prot)

quinone + succinate --> quinol + fumarate (according to UniProt)

The protein

Protein family

succinate dehydrogenase/fumarate reductase iron-sulfur protein family (according to Swiss-Prot)

succinate dehydrogenase/fumarate reductase iron-sulfur protein family (single member, according to UniProt)

The protein

[SW|Cofactors]

[3 Fe- 4 S] cluster

Fe-S cluster [pubmed|29292548]

The protein

Structure

[PDB|1NEK] (''E. coli'')

[PDB|1NEK] (''E. coli'') [pubmed|12560550]

Biological materials

Mutant

GP792 (''[[gene|sdhC]]-[[gene|sdhA]]-[[gene|sdhB]]''::''phleo''), available in [SW|Jörg Stülke]'s lab

GP2342 (''[[gene|sdhC]]-[[gene|sdhA]]-[[gene|sdhB]]''::''kan''), Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab

GP2343 (''[[gene|sdhC]]-[[gene|sdhA]]-[[gene|sdhB]]''::''lox72''), Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab

GP792 ∆(''[[gene|sdhC]]-[[gene|sdhA]]-[[gene|sdhB]]'')::''phleo'', available in [SW|Jörg Stülke]'s lab

GP2342 ∆(''[[gene|sdhC]]-[[gene|sdhA]]-[[gene|sdhB]]'')::''kan'', Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab

GP2343 ∆(''[[gene|sdhC]]-[[gene|sdhA]]-[[gene|sdhB]]'')::''lox72'', Cre-recombinase is integrated in ''[[gene|sacA]]'', available in [SW|Jörg Stülke]'s lab

BKE28430 ∆([[gene|sdhB]])::erm trpC2 available at [http://www.bgsc.org/getdetail.php?bgscid=BKE28430 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TATGGTTTTTTGTTCACTCA, downstream forward: _UP4_TAAGAAGAAAAAACCTCTTC

BKK28430 ∆([[gene|sdhB]])::kan trpC2 available at [http://www.bgsc.org/getdetail.php?bgscid=BKK28430 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TATGGTTTTTTGTTCACTCA, downstream forward: _UP4_TAAGAAGAAAAAACCTCTTC

References

Original publications

1707123, 6401289, 1324713, 3036777, 2495271, 3027051, 7748886, 2837411, 12560550, 3910107, 6799760, 22389480, 23880299

1707123, 6401289, 1324713, 3036777, 2495271, 3027051, 7748886, 2837411, 12560550, 3910107, 6799760, 22389480, 23880299, 12560550

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|4Fe-4S ferredoxin-type domain] (aa 146-174) (according to UniProt)