SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:30 GMT+0100 (CET)2025-05-22 13:46:41

locus

BSU02100

BSU_02100

ec

outlinks

bsu

BSU02100

BSU_02100

aminos

MNEQIPHDKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYDTDRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLKTTSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYKEWLRSGNSREREMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRKS

[SW|Categories] containing this gene/protein

[SW|general stress proteins (controlled by SigB)], [SW|resistance against oxidative and electrophile stress], [SW|electron transport/ other], [SW|lipid metabolism/ other]

Gene

Coordinates on the chromosome (coding sequence)

229,525 -> 230,778

The protein

Catalyzed reaction/ biological activity

hydroxylation of a long-chain fatty acid (e.g. myristic acid) at the alpha- and beta-positions using hydrogen peroxide as an oxidant [Pubmed|12519760]

hydroxylation of a long-chain fatty acid (e.g. myristic acid) at the alpha- and beta-positions using hydrogen peroxide as an oxidant [Pubmed|12519760]

1,2-saturated fatty acid + H2O2 --> 2-hydroxy fatty acid + H2O (according to UniProt)

2,3-saturated fatty acid + H2O2 --> 3-hydroxy fatty acid + H2O (according to UniProt)

The protein

Protein family

[SW|cytochrome P450] family (according to Swiss-Prot)

[SW|cytochrome P450] family (according to UniProt)

Expression and Regulation

Operon

''cypC'' (according to [http://dbtbs.hgc.jp/COG/prom/cypC.html DBTBS])

Expression and Regulation

[SW|Sigma factor]

[[protein|SigB]] [Pubmed|15805528]

Expression and Regulation

Regulation

induced by stress ([[protein|SigB]]) [Pubmed|15805528]

proteinLength

417

geneLength

1254

Gene

Coordinates

229,525 230,778

The protein

Paralogous protein(s)

[[this]]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]

Biological materials

Mutant

MGNA-B961 (ybdT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1960 NBRP B. subtilis, Japan]

BKE02100 ([[gene|cypC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGCTTACCCTGCCTTC, downstream forward: _UP4_TAAATTAAAAAGCTCTCTTC

BKK02100 ([[gene|cypC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCGCTTACCCTGCCTTC, downstream forward: _UP4_TAAATTAAAAAGCTCTCTTC