SubtiBank SubtiBank
Version comparison:

Tue Dec 13 2016 11:16:32 GMT+0100 (CET)2025-05-29 13:37:42

locus

BSU14110

BSU_14110

ec

outlinks

bsu

BSU14110

BSU_14110

aminos

MADSFLFYNLSEAQMTFQDVMERLKAFVQKDPRSSYVLSIGTDSQVYRDYTKFITALHLHRTGKGAWGCLKNHTVDRPIHSLREKISLETAYSQETAAHILDGHLMDITDLLLPFTGEGADLTFEVHLDIGKKGLTKDLIQEMTGRITSMGIEAKIKPDSYTAFSYANRFTK

[SW|Categories] containing this gene/protein

[SW|proteins of unknown function]

Gene

Coordinates on the chromosome (coding sequence)

1,484,466 -> 1,484,984

Expression and Regulation

Operon

''[[protein|ykuJ]]-[[protein|ykuK]]-[[protein|abbA]]-[[protein|ykuL]]-[[protein|ccpC]]'' [Pubmed|16395550]

Biological materials

Mutant

GP214 (deletion of ''[[protein|ykuJ]]-[[protein|ykuK]]-[[protein|abbA]]-[[protein|ykuL]]'', replaced by ''aphA3''), available in the [SW|Stülke] lab

MGNA-A772 (ykuK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/772 NBRP B. subtilis, Japan]

GP214 (deletion of ''[[gene|ykuJ]]-[[gene|ykuK]]-[[gene|abbA]]-[[gene|darB]]'', replaced by ''aphA3''), available in [SW|Jörg Stülke]'s lab

BKE14110 ([[gene|ykuK]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCACGACACTCCTTTTCA, downstream forward: _UP4_TAATTTGGCTGAAAAAGCCA

BKK14110 ([[gene|ykuK]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14110 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCACGACACTCCTTTTCA, downstream forward: _UP4_TAATTTGGCTGAAAAAGCCA

Biological materials

lacZ fusion

pGP709 (in [[protein|pAC5]]), available in [SW|Stülke] lab, pGP713 (in [[protein|pAC6]]), available in [SW|Stülke] lab

pGP709 (in [SW|pAC5]), available in [SW|Jörg Stülke]'s lab, pGP713 (in [SW|pAC6]), available in [SW|Jörg Stülke]'s lab

References

16395550, 16165328

16395550, 16165328, 17654551

proteinLength

172

geneLength

519

Gene

Coordinates

1,484,466 1,484,984

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|2E3U] (from Pyrococcus horikoshii, 24% identity) [pubmed|17654551]

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]