SubtiBank SubtiBank
Version comparison:

2018-02-12T14:45:20.000Z2025-05-17 10:39:32

description

similar to spore cortex protein

similar to E. coli YebC putative transcription factor

locus

BSU27820

BSU_27820

geneLength

720

723

ec

outlinks

bsu

BSU27820

BSU_27820

Gene

Coordinates

2,843,106 → 2,843,828

2,843,106 2,843,828

The protein

Protein family

UPF0082 family (according to Swiss-Prot)

TACO1 family (with [[protein|YeeI]], according to UniProt)

The protein

Paralogous protein(s)

[[protein|YeeI]]

[[this]]

Biological materials

Mutant

MGNA-A009 (yrbC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/9 NBRP B. subtilis, Japan]

BKE27820 (Δ[[gene|yrbC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCACCTTCTTTTA, downstream forward: _UP4_TAAAAAACCGGCACGAGGTC

BKK27820 (Δ[[gene|yrbC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCACCTTCTTTTA, downstream forward: _UP4_TAAAAAACCGGCACGAGGTC

MGNA-A009 (yrbC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/9 NBRP B. subtilis, Japan]

BKE27820 ([[gene|yrbC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCACCTTCTTTTA, downstream forward: _UP4_TAAAAAACCGGCACGAGGTC

BKK27820 ([[gene|yrbC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTTCACCTTCTTTTA, downstream forward: _UP4_TAAAAAACCGGCACGAGGTC

The protein

Structure

[PDB|1KON] (from E. coli, 50% identity)