SubtiBank SubtiBank
Version comparison:

2017-07-26 14:56:552025-04-30 06:17:34

locus

BSU37080

BSU_37080

geneLength

1281

1284

outlinks

bsu

BSU37080

BSU_37080

Gene

Coordinates

3,803,400 → 3,804,683

3,803,400 3,804,683

Gene

Phenotypes of a mutant

loss of motility due to poor expression of the [SW|SigD regulon], this can be partially reversed by inactivation of [[gene|slrR]] [pubmed|28723971]

no [SW|biofilm formation], this can be suppressed by deletion of [[gene|sinR]] and by switching of expression of the [[gene|epsO]]-[[gene|epsA]] antisense transcript [pubmed|28723971]

increased efficiency of [SW|sporulation], due to enhanced [[protein|Spo0A]] phosphorylation [pubmed|28723971]

loss of motility due to poor expression of the [[regulon|SigD regulon]], this can be partially reversed by inactivation of [[gene|slrR]] [pubmed|28723971]

no [[category|Biofilm formation]], this can be suppressed by deletion of [[gene|sinR]] and by switching of expression of the [[gene|epsO]]-[[gene|epsA]] antisense transcript [pubmed|28723971]

increased efficiency of [[category|Sporulation]], due to enhanced [[protein|Spo0A]] phosphorylation [pubmed|28723971]

The protein

Protein family

rho family (according to Swiss-Prot)

Rho family (single member, according to UniProt)

References

Reviews

16946247, 12887917, 16946247, 8576105, 23347833, 12887917, 23704790, 26796109

16946247, 12887917, 16946247, 8576105, 23347833, 12887917, 23704790, 26796109, 28731845, 29094196

References

Original publications

11566991, 10027981, 20075920, 22383849, 12859904, 21040729, 25112476, 28723971

11566991, 10027981, 20075920, 22383849, 12859904, 21040729, 25112476, 28723971, 26857544, 29931073, 30845912

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|CSD domain] (aa 54-127) (according to the InterPro database)

Rho RNA-BD domain (aa 51-125) (according to UniProt)

Biological materials

Mutant

GP2673 ([[gene|rho]]::''ermC''), available in [SW|Jörg Stülke]'s lab

BKE37080 ([[gene|rho]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAACACCACGCTTTT, downstream forward: _UP4_TAAATTGTATTTGCAAAAGA

BKK37080 ([[gene|rho]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37080 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAAAAACACCACGCTTTT, downstream forward: _UP4_TAAATTGTATTTGCAAAAGA