SubtiBank SubtiBank
Version comparison:

Wed Aug 31 2016 18:01:03 GMT+0200 (CEST)2025-05-10 18:58:52

locus

BSU29660

BSU_29660

ec

outlinks

bsu

BSU29660

BSU_29660

[SW|Categories] containing this gene/protein

[SW|translation], [SW|essential genes], [SW|universally conserved proteins]

Gene

Coordinates on the chromosome (coding sequence)

3,035,730 -> 3,036,332

The protein

Protein family

[SW|ribosomal protein] S4P family (according to Swiss-Prot)

[SW|S4 RNA-binding domain] superfamily (according to http://www.ebi.ac.uk/interpro/entry/IPR036986 Interpro)

universal [SW|ribosomal protein] uS4 family (single member, according to UniProt)

Expression and Regulation

Operon

''[[protein|rpsD]]'' [Pubmed|1699930]

Expression and Regulation

[SW|Sigma factor]

[[protein|SigA]] [Pubmed|1699930]

Expression and Regulation

Regulation

[[protein|RelA]] dependent downregulation (Class I) during stringent response [Pubmed|11948165]

autorepression of ''rpsD'' expression upon binding of excess [[protein|RpsD]] to a [SW|RNA switch] in the untranslated region of the ''rpsD'' mRNA [Pubmed|23611891,1906866]

expression is reduced during ethanol stress due to the action of the antisense RNA [[protein|S1136-1134]] [Pubmed|26115952]

References

1699930, 2121712, 6420647, 1400226, 1906866, 19653700, 11489846, 23611891, 23002217, 25548247, 25548248, 26115952, 25903689

1699930, 2121712, 6420647, 1400226, 1906866, 19653700, 11489846, 23611891, 23002217, 25548247, 25548248, 26115952, 25903689, 27120414, 29794222

proteinLength

200

geneLength

603

Gene

Coordinates

3,035,730 3,036,332

The protein

Paralogous protein(s)

[[this]]

The protein

[SW|Domains]

[SW|S4 RNA-binding domain] (aa 92-155) (according to UniProt)

Expression and Regulation

Operons

[[this]]

Expression and Regulation

Other regulations

[[this]]