Fri Dec 16 2016 19:37:44 GMT+0100 (CET)2025-05-23 12:51:48
description
glycine betaine/carnitine/choline ABC transporter
glycine betaine/carnitine/choline/arsenobetaine/arsenocholine [SW|ABC transporter]
locus
BSU33800
BSU_33800
product
glycine betaine/carnitine/choline ABC transporter
glycine betaine/carnitine/choline/arsenobetaine/arsenocholine [SW|ABC transporter]
ec
outlinks
bsu
BSU33800
BSU_33800
[SW|Categories] containing this gene/protein
[SW|ABC transporters], [SW|coping with hyper-osmotic stress], [SW|membrane proteins]
Gene
Coordinates on the chromosome (coding sequence)
3,467,546 -> 3,468,235
The protein
Protein family
CysTW subfamily (according to Swiss-Prot)
[SW|Binding-protein-dependent transport system permease family] (according to UniProt)
[SW|CysTW subfamily] (according to UniProt)
The protein
Paralogous protein(s)
[SW|OpuBD]
[[this]]
The protein
[SW|Interactions]
[SW|OpuCA]-([SW|OpuCB]-[SW|OpuCD])-[SW|OpuCC] [Pubmed|10092453]
Expression and Regulation
Operon
''[SW|opuCA]-[SW|opuCB]-[SW|opuCC]-[SW|opuCD]'' [Pubmed|10216873]
Expression and Regulation
Regulation
induced by salt stress [Pubmed|23960087,10216873]
repressed by choline ([[protein|OpcR]]) [Pubmed|23960087]
Expression and Regulation
Regulatory mechanism
[[protein|OpcR]]: transcription repression [Pubmed|23960087]
[[protein|RemA]]: transcription activation [Pubmed|23646920]
References
Original publications
proteinLength
229
geneLength
690
Gene
Coordinates
3,467,546 3,468,235
The protein
Catalyzed reaction/ biological activity
uptake of glycine betaine, arsenocholine and arsenobetaine [pubmed|29159878]
The protein
[SW|Domains]
[SW|ABC transmembrane type-1 domain] (aa 22-202) (according to UniProt)
Expression and Regulation
Operons
[[this]]
Expression and Regulation
Other regulations
[[this]]
Biological materials
Mutant
BKE33800 ([[gene|opuCD]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCCATATGATCCACCTCTT, downstream forward: _UP4_TAAATACAACAGAGGTGGTT
BKK33800 ([[gene|opuCD]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33800 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTCCATATGATCCACCTCTT, downstream forward: _UP4_TAAATACAACAGAGGTGGTT